DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and si:dkeyp-84f3.5

DIOPT Version :10

Sequence 1:NP_610290.2 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001313282.1 Gene:si:dkeyp-84f3.5 / 334144 ZFINID:ZDB-GENE-050208-162 Length:580 Species:Danio rerio


Alignment Length:285 Identity:61/285 - (21%)
Similarity:87/285 - (30%) Gaps:114/285 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   406 SFLPAKGSESQ-VLY-CDYCDKRFHGDYNLRVH-IVKAHEVGDLPYLCSFCPRRFDRHVDMDRHK 467
            :.:|:|..|.: .|| ||.|.:.|....:|.:| ..:|.|.|   :.|:.|.:     |..||..
Zfish   101 TIVPSKMPEKEPALYKCDRCGQLFKTSKSLHLHQQYRALEQG---FKCTLCCK-----VLNDRES 157

  Fly   468 LRSHF-----ERKLKCQYCEKSFAVDTDLKVHTLIHTG------------------ERPHVCDIC 509
            |::|.     ||...|.:|.|.|.....|..|.....|                  :|.:.|..|
Zfish   158 LQNHLQNHAHERFYSCGHCGKRFLRQDSLLSHQKQWHGSASSRILSRSQEDQENSMDRSYPCKSC 222

  Fly   510 GKTFRLKLLLDHHVNG-VHLNIRPYS---------------------------CNMCTKTFRKKF 546
            |..|.....|..|:|. ..:|..|..                           |.:|.:.|....
Zfish   223 GLRFFWLSDLQSHLNSHSRVNKSPNEVMQDQALGEENRKIDDNSVISQFNEPCCGLCGQNFLNTS 287

  Fly   547 ELANH---------------------------------IKGH-----LNIRDK------------ 561
            :|..|                                 .|.|     :||:.|            
Zfish   288 DLREHHKVEHPDEIEVKDSSVLPAKAKQQYHGVMRHMVAKQHKQLLRVNIKGKPKRINRATYTGK 352

  Fly   562 --KCEYCDATFYDHSSLSRHRRSHR 584
              .|::|...|...||||||.|.|:
Zfish   353 LFSCKHCHRVFVHSSSLSRHMRYHK 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_610290.2 MADF_DNA_bdg 202..287 CDD:463144
MADF_DNA_bdg 321..408 CDD:463144 0/1 (0%)
C2H2 Zn finger 420..441 CDD:275368 6/21 (29%)
COG5048 <424..583 CDD:227381 52/262 (20%)
C2H2 Zn finger 450..471 CDD:275368 6/20 (30%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
C2H2 Zn finger 506..527 CDD:275368 7/21 (33%)
C2H2 Zn finger 535..555 CDD:275368 6/52 (12%)
C2H2 Zn finger 563..583 CDD:275368 10/19 (53%)
si:dkeyp-84f3.5NP_001313282.1 C2H2 Zn finger 117..137 CDD:275368 6/19 (32%)
C2H2 Zn finger 145..165 CDD:275368 7/24 (29%)
C2H2 Zn finger 173..194 CDD:275368 6/20 (30%)
C2H2 Zn finger 219..239 CDD:275368 7/19 (37%)
C2H2 Zn finger 276..297 CDD:275368 5/20 (25%)
zf-C2H2 354..376 CDD:395048 10/21 (48%)
C2H2 Zn finger 356..376 CDD:275368 10/19 (53%)
C2H2 Zn finger 383..400 CDD:275368
C2H2 Zn finger 475..494 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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