DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and zld

DIOPT Version :9

Sequence 1:NP_001260778.1 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster


Alignment Length:111 Identity:32/111 - (28%)
Similarity:53/111 - (47%) Gaps:2/111 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 KLKCQYCEKSFAVDTDLKVHT-LIHTGERPHVCDICGKTFRLKLLLDHHVNGVHLNIRPYSCNMC 538
            ::||..|:|.|..:..|..|. ..|:||.|..|..|||.|:.:.:...|:.......:|:.|.:|
  Fly  1325 RIKCLECDKEFTKNCYLTQHNKSFHSGEYPFRCQKCGKRFQSEDVYTTHLGRHRTQDKPHKCELC 1389

  Fly   539 TKTFRKKFELANHIKG-HLNIRDKKCEYCDATFYDHSSLSRHRRSH 583
            .|.|..|.:|..|::. |..::...|:.|:..|.....|.:|..:|
  Fly  1390 PKQFHHKTDLRRHVEAIHTGLKQHMCDICEKGFCRKDHLRKHLETH 1435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_001260778.1 MADF_DNA_bdg 202..287 CDD:287510
GT1 321..408 CDD:304916
C2H2 Zn finger 420..441 CDD:275368
COG5048 <424..583 CDD:227381 31/109 (28%)
C2H2 Zn finger 450..471 CDD:275368
C2H2 Zn finger 478..498 CDD:275368 6/20 (30%)
zf-H2C2_2 490..513 CDD:290200 10/23 (43%)
C2H2 Zn finger 506..527 CDD:275368 6/20 (30%)
C2H2 Zn finger 535..555 CDD:275368 7/20 (35%)
C2H2 Zn finger 563..583 CDD:275368 5/19 (26%)
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 18/60 (30%)
C2H2 Zn finger 1328..1349 CDD:275368 6/20 (30%)
C2H2 Zn finger 1357..1377 CDD:275368 6/19 (32%)
C2H2 Zn finger 1386..1407 CDD:275368 7/20 (35%)
zf-H2C2_2 1398..1422 CDD:290200 5/23 (22%)
zf-C2H2 1413..1435 CDD:278523 5/21 (24%)
C2H2 Zn finger 1415..1435 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457173
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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