DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and CG8944

DIOPT Version :10

Sequence 1:NP_610290.2 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_573065.1 Gene:CG8944 / 32517 FlyBaseID:FBgn0030680 Length:762 Species:Drosophila melanogaster


Alignment Length:767 Identity:155/767 - (20%)
Similarity:267/767 - (34%) Gaps:231/767 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CGNVMTNSKYEMFRLKCLYCSIESELKDWELFIVHVKSAHYCEDEDV------------------ 50
            ||.|.....::.|.|:|::||  .:...::.||.|:::.| ..|:.|                  
  Fly    22 CGMVTATDDFQYFALRCIFCS--EKFLYFDSFIGHMQTVH-LGDQSVANTSSRLPFNLGEPMSLS 83

  Fly    51 -------RINEIKE----DT----------EELYSVVDAADPAIAYGPDEFFEVIENSNGVDQWM 94
                   ..:||::    ||          :||..:..:.|..:|...|:..:.:.:|       
  Fly    84 GRNGDLPNFHEIEDLTDADTALLEPQMVIKQELQDLPCSDDDVVAGEEDDDEQRLNDS------- 141

  Fly    95 EADSKD-IQYEEDATAWSAAT------------NNSWEF---GPGGSSLELPAGKEVTQMDESS- 142
            |||..: |..|.|....|:.|            :.|.|.   |.|.||::.....:.:.||::| 
  Fly   142 EADEDEAILPESDVPVVSSKTRARKKVTKQRQRDMSSELLIAGDGDSSMDDYGDPDHSYMDDNSG 206

  Fly   143 ----------QNHIPLNTDDDDVDCSDFFMSEDDLAPPRKPGRPPRRTRPGQVFKFKVSFIRSNP 197
                      .||....|:.|       |:|.|::......||....|          ..|:...
  Fly   207 EYMDFAGFDGVNHSGFGTESD-------FLSYDEMVEESLLGRDREVT----------MHIKDRK 254

  Fly   198 RVLHLIQAYKEHPCLWNPSDEHYQDEPARSMAYEAIMERMDRKANVLFTVEELKKTLEQLHVQY- 261
            .:..||.:|:.:|.||:..:..::|...|:...:.|:.....:.|:....:.:.:..:.|...| 
  Fly   255 MIQFLIHSYQRNPFLWDHGNAQFRDRVKRARFLDWIVLEFKSRFNISLAKDAITRKWDNLRTVYK 319

  Fly   262 ----TLALETKQRGKLVGLAARYFAKCEFLSVAPVVTPRENEEDNDLTAIKLNFKE------ENL 316
                .:|||......|     .||.:..||:    .....|::.:|....:.:::.      .:.
  Fly   320 RECNRMALEKTNISTL-----WYFKELHFLN----EVYSYNDKMSDAVVKETSYRRRFSAIWNDT 375

  Fly   317 ITTSFIETYANYPVLYNQALPDFGSIEIRADAFKRMAKEFQPVVKANETDVYIAVNKLRRWLYD- 380
            .|...:.....|...||:..||:.|.|.|.:...:||.|.|.::......:...:::||   :| 
  Fly   376 STAKLLSMVKRYQCFYNRFDPDYRSKERRGEGLHQMAIELQQLIDVTTIQISKRISQLR---FDY 437

  Fly   381 ---AIRRLKSKELIQKCSKQEVQYLQM-----------CSFLPA---------------KGSESQ 416
               .:.||.|:.|.:|.....:.|.||           |:..|.               :.|...
  Fly   438 SKQKMERLNSERLGKKFIANYLYYDQMHFMDDDIPPFKCAHCPEIVQTLRELDLHMLTHQPSLGG 502

  Fly   417 VLYCDYCDKRFHG----DYNLRVHIVKAHEVGDLPYLCSFCPRRFDRHVDMDRHKLRSHFE---- 473
            ..||:.|..:||.    |.:.::|:   ..|.::.:.|..|...|....:.|.| ||.|.|    
  Fly   503 GYYCNICSIQFHNAQEFDNHKQLHL---GGVTEIKFNCELCTASFREKANYDEH-LRRHNEELFL 563

  Fly   474 --------------------------------RKLK----------------------------- 477
                                            ||.:                             
  Fly   564 PSLALNHSIMEGGLGDDEIGVEGEESRGSGSRRKRRHAAKATDDMVDDDDRIGGGGGGGSGGGGT 628

  Fly   478 -------CQYCEKSFAVDTDLKVHTLIHTGERP--HVCDI--CGKTFRLKLLLDHHVNGVHLNIR 531
                   |..|.:|||....|..|.::|..||.  :.||.  |.|:|..:..|..|:. .|.:..
  Fly   629 DIAKPYGCDVCRRSFATPGHLNAHRIVHQDERERCYKCDYPQCNKSFVARNSLFEHLK-QHYSNE 692

  Fly   532 PYSCNMCTKTFRKKFELANHIKGHLNIRDKKCEYCDATFYDHSSLSRHRRSH 583
            .:.|::|.|||:....|.||.:.|..|:...|:.|.:.|...:.|..|:|.|
  Fly   693 EFKCDICGKTFKSTKNLQNHKQIHDKIKRYVCQICGSAFAQAAGLYLHKRRH 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_610290.2 MADF_DNA_bdg 202..287 CDD:463144 18/89 (20%)
MADF_DNA_bdg 321..408 CDD:463144 24/101 (24%)
C2H2 Zn finger 420..441 CDD:275368 6/24 (25%)
COG5048 <424..583 CDD:227381 50/238 (21%)
C2H2 Zn finger 450..471 CDD:275368 7/20 (35%)
C2H2 Zn finger 478..498 CDD:275368 7/19 (37%)
C2H2 Zn finger 506..527 CDD:275368 7/22 (32%)
C2H2 Zn finger 535..555 CDD:275368 8/19 (42%)
C2H2 Zn finger 563..583 CDD:275368 6/19 (32%)
CG8944NP_573065.1 MADF_DNA_bdg 259..344 CDD:463144 18/89 (20%)
MADF 379..472 CDD:214738 23/95 (24%)
C2H2 Zn finger 476..496 CDD:275368 2/19 (11%)
C2H2 Zn finger 506..526 CDD:275368 5/19 (26%)
C2H2 Zn finger 537..557 CDD:275368 7/20 (35%)
C2H2 Zn finger 636..656 CDD:275368 7/19 (37%)
COG5048 <666..734 CDD:227381 21/68 (31%)
C2H2 Zn finger 666..688 CDD:275368 7/22 (32%)
C2H2 Zn finger 696..716 CDD:275368 8/19 (42%)
C2H2 Zn finger 724..744 CDD:275368 6/19 (32%)

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