DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1603 and mnm-2

DIOPT Version :9

Sequence 1:NP_001260778.1 Gene:CG1603 / 35683 FlyBaseID:FBgn0033185 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_509256.2 Gene:mnm-2 / 182489 WormBaseID:WBGene00003380 Length:249 Species:Caenorhabditis elegans


Alignment Length:274 Identity:61/274 - (22%)
Similarity:104/274 - (37%) Gaps:68/274 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 ENEEDNDLTAIKLNFKEENLITTSFIETYANYPVLYNQALPDFGSIE--------IRADAFKRMA 353
            |.:|:.:|::.::.  .||.:.|   |:.::......|..|||.:..        .:..|.||..
 Worm    32 EEDEEEELSSSEVT--SENDMET---ESASSSASSVGQPKPDFSAFHKIFSNLDFAKLAAVKRNG 91

  Fly   354 KEFQPVVKANETDVYIAVNKLRRWLYDAIRRLKSKELIQKCSK----QEVQYLQMCSFLPAKGSE 414
             ..||::             .|...:..:...|...|:|:..:    |.:.:.....|:|...:.
 Worm    92 -HHQPML-------------FRPECFFPLELSKHLHLVQQTFQMNVLQNLGHTLPLPFVPMLKNV 142

  Fly   415 SQVLYCDYCDKRFHGDYNLRVHIVKAHEVGDLPYLCSFCPRRFDRHVDMDRHKLRSHFERKLKCQ 479
            :.      ..||.:   |.|...|...:.|:|                           :|.:|.
 Worm   143 AP------AQKRLN---NKRASYVDHSQKGNL---------------------------KKYRCD 171

  Fly   480 YCEKSFAVDTDLKVHTLIHTGERPHVCDICGKTFRLKLLLDHHVNGVHLNIRPYSCNMCTKTFRK 544
            .|:|:|:....|..|..|||||:|..|:.||:.||....|..| ...|..::||.|.:|.|.|.:
 Worm   172 VCDKTFSRSNTLITHKRIHTGEKPFKCEHCGRAFRQPGNLTRH-RLTHTTVKPYVCGLCDKAFNR 235

  Fly   545 KFELANHIKGHLNI 558
            ...|..|::.|.|:
 Worm   236 ASNLHTHMRTHTNV 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1603NP_001260778.1 MADF_DNA_bdg 202..287 CDD:287510
GT1 321..408 CDD:304916 15/98 (15%)
C2H2 Zn finger 420..441 CDD:275368 5/20 (25%)
COG5048 <424..583 CDD:227381 38/135 (28%)
C2H2 Zn finger 450..471 CDD:275368 0/20 (0%)
C2H2 Zn finger 478..498 CDD:275368 6/19 (32%)
zf-H2C2_2 490..513 CDD:290200 11/22 (50%)
C2H2 Zn finger 506..527 CDD:275368 7/20 (35%)
C2H2 Zn finger 535..555 CDD:275368 6/19 (32%)
C2H2 Zn finger 563..583 CDD:275368
mnm-2NP_509256.2 zf-C2H2 168..190 CDD:278523 6/21 (29%)
C2H2 Zn finger 170..190 CDD:275368 6/19 (32%)
zf-H2C2_2 183..207 CDD:290200 12/23 (52%)
C2H2 Zn finger 198..218 CDD:275368 7/20 (35%)
zf-H2C2_2 210..235 CDD:290200 9/25 (36%)
zf-C2H2 224..246 CDD:278523 7/21 (33%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 105 1.000 Inparanoid score I3519
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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