DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment az2 and CG7987

DIOPT Version :9

Sequence 1:NP_610289.2 Gene:az2 / 35682 FlyBaseID:FBgn0025185 Length:593 Species:Drosophila melanogaster
Sequence 2:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster


Alignment Length:666 Identity:148/666 - (22%)
Similarity:223/666 - (33%) Gaps:205/666 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AHQND----CYV-EMEFKRWREFIVHVKEHLEANPSMQQELTTSEVISSAKCEEEVSPAKVFIVE 80
            |||||    |.: ...|.|..|.|.|.|.|.||..:...|...:...||:..:          .|
  Fly   161 AHQNDRPHLCKLCGARFSRRAELISHFKAHAEAQDAADAEAAAAAADSSSAIK----------FE 215

  Fly    81 EPPENCLAEDMFVDVPPSSENDESTSPVEEEEEEDDEVDSSSMTVDCELGTRNSTHFAPLTKFNP 145
            ...:..|.:..:....|..::.      :|:|.....|......|: |.|.:....: |.|...|
  Fly   216 HQTQRQLDDHYYEQEWPLFQHQ------QEQENAQQNVHQQHQIVE-EGGIQLVASY-PDTVAQP 272

  Fly   146 T------FYRRSPR--ITQFIELYKQQTCLWDPADESYRDKEKRANAYEELLEQLKATVNLHLTA 202
            .      ..|..|:  .:|||.:          :|:|..|...                  ::..
  Fly   273 AAPSRGRISRLKPKEESSQFIVI----------SDKSVEDSRP------------------YMEP 309

  Fly   203 YKLKKCITSLHAQYASISRQKKTQKLTKVPLYYHGK--------YSFLAERGSLEDADSDDVDGD 259
            ...:..:|:  :::.::....:    ...|:..|.|        .:|..|:..:....:..||..
  Fly   310 EPAQPVVTT--SEFIAVEPPPQ----PNFPVLDHSKPFVCQQCGLAFAREKALVSHTKNHRVDSP 368

  Fly   260 ---GKIKLVF-----TEENQLTTQFIDLYSKFPQLYDPAHKHFCNLNVRKSSLIEITDLLTSEF- 315
               .:.:.:|     .:|:|.|.||.:..|:    ||||...      ...|..|..:.|..|| 
  Fly   369 FECNQCQEMFWDNSSLQEHQKTHQFEESNSE----YDPASAE------ESGSESEADEQLYGEFY 423

  Fly   316 --SLGLVTHYDVYDSIQSMRQWYSRR-------------IKTLTDVQCVG-LSLAEKQYIERCNS 364
              ..|:..|          ||...||             :.:.:||...| :.||:......||:
  Fly   424 CNECGISFH----------RQDLLRRHAKMHCKPSDQAAVGSNSDVTAGGDVELAKDSSGHCCNT 478

  Fly   365 FMPTKSFRQKL---------------KCEVCEHSFSTDHALQAH-------------------QF 395
            .  .|||...|               ||.:|..||..:.|::.|                   :.
  Fly   479 C--GKSFPSALEMLAHAEIHARFPPFKCVLCGISFYEEQAIKRHLHTRHPSELNANSCVLCGKEC 541

  Fly   396 RDHK-MGDGGW-------FRCTLCELNFDRKCHLQQHSQRVHMDKSFVCEICSRSFAFGNQLAIH 452
            ||.| :....|       ..|:.|..||..|..|::| ...|.|||.|||:|...|..|..|:.|
  Fly   542 RDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRH-MASHRDKSVVCEVCQEEFPDGRTLSNH 605

  Fly   453 KRTHDEKHVAKPFVCEFCGKCFKQKIQMTTHVTAVHTKIRAFKCDMCPKDFLTKRDLKDHVKAHL 517
            :.:|......|.|.|..|||.|..:.....|| .:||..|.:.                      
  Fly   606 RHSHSTTTPGKLFPCLECGKTFGSRSSQQIHV-RIHTGERPYG---------------------- 647

  Fly   518 NIRDKVCEVCQKAFTNANALVKHRHIHK-EKTLQCSLCTTRFSERVSLGVHMRRTHK-------- 573
                  |..|.|||.:...|.||..||. ||...||:|...|::||.|..|:|..|.        
  Fly   648 ------CRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDVARNT 706

  Fly   574 ----ILKSSLSSSDAL 585
                :....|:||:.|
  Fly   707 YHCTVCSEDLASSNDL 722

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
az2NP_610289.2 MADF_DNA_bdg 157..242 CDD:287510 9/92 (10%)
GT1 276..>341 CDD:304916 17/80 (21%)
C2H2 Zn finger 377..398 CDD:275368 7/39 (18%)
C2H2 Zn finger 408..429 CDD:275368 7/20 (35%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..488 CDD:275368 7/20 (35%)
C2H2 Zn finger 496..516 CDD:275368 0/19 (0%)
C2H2 Zn finger 524..544 CDD:275368 8/19 (42%)
C2H2 Zn finger 551..572 CDD:275368 9/20 (45%)