DRSC/TRiP Functional Genomics Resources

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Protein Alignment az2 and LOC102554302

DIOPT Version :9

Sequence 1:NP_610289.2 Gene:az2 / 35682 FlyBaseID:FBgn0025185 Length:593 Species:Drosophila melanogaster
Sequence 2:XP_006230434.1 Gene:LOC102554302 / 102554302 RGDID:7506689 Length:275 Species:Rattus norvegicus


Alignment Length:61 Identity:23/61 - (37%)
Similarity:30/61 - (49%) Gaps:8/61 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 QHSQRVHMDKSFVCEICSRSFAFGNQLAIHKRTHDEKHVAKPFVCEFCGKCFKQKIQMTTH 483
            |.|||.|     ||..|.|.|.:.:.|..|:|.|..:   :||.|..||..||:|..:..|
  Rat   176 QPSQRRH-----VCVDCGRRFTYPSLLISHRRMHSGE---RPFPCPECGVRFKRKFAVKAH 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
az2NP_610289.2 MADF_DNA_bdg 157..242 CDD:287510
GT1 276..>341 CDD:304916
C2H2 Zn finger 377..398 CDD:275368
C2H2 Zn finger 408..429 CDD:275368 4/5 (80%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 467..488 CDD:275368 7/17 (41%)
C2H2 Zn finger 496..516 CDD:275368
C2H2 Zn finger 524..544 CDD:275368
C2H2 Zn finger 551..572 CDD:275368
LOC102554302XP_006230434.1 KRAB 26..86 CDD:214630
KRAB 26..65 CDD:279668
COG5048 <166..>234 CDD:227381 23/61 (38%)
zf-C2H2 182..204 CDD:278523 9/26 (35%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
zf-H2C2_2 197..221 CDD:290200 10/26 (38%)
C2H2 Zn finger 212..232 CDD:275368 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335956
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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