DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu2 and TUF1

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_014830.1 Gene:TUF1 / 854359 SGDID:S000005713 Length:437 Species:Saccharomyces cerevisiae


Alignment Length:450 Identity:218/450 - (48%)
Similarity:303/450 - (67%) Gaps:29/450 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGLLPKLWRQC---EAGLVRRISQALIGPGASQSRWTGTRLLATSADKNPAPGLRELPHCNVGT 62
            ||.|||:|..:.   .:|.:.|:| ::|....||:    |...|.:.|       |..||.|:||
Yeast     1 MSALLPRLLTRTAFKASGKLLRLS-SVISRTFSQT----TTSYAAAFD-------RSKPHVNIGT 53

  Fly    63 IGHVDHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPEEKARGITINACHIGYSTTERTYAHTDC 127
            ||||||||||||||||:..:.||.|.:|.|..||:||||:||||||:..|:.|.|.:|.|:|.||
Yeast    54 IGHVDHGKTTLTAAITKTLAAKGGANFLDYAAIDKAPEERARGITISTAHVEYETAKRHYSHVDC 118

  Fly   128 PGHADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQRIIVFINKADLVDQ-EVL 191
            |||||||||||:||:||||||:|||||||||||||||||||:|||:|.|:||:||.|.:|. |:|
Yeast   119 PGHADYIKNMITGAAQMDGAIIVVAATDGQMPQTREHLLLARQVGVQHIVVFVNKVDTIDDPEML 183

  Fly   192 ELVEIEMREMLSDFGFDGVNSPVICGSALLALREDKSEFGVPSIEKLLEQCDSYIPTPQRDISSP 256
            ||||:||||:|:::||||.|:|:|.||||.||...:.|.|..:|.|||:..|.|||||:||::.|
Yeast   184 ELVEMEMRELLNEYGFDGDNAPIIMGSALCALEGRQPEIGEQAIMKLLDAVDEYIPTPERDLNKP 248

  Fly   257 FILPIDNAFTVPGRGTVVVGTIKRGTIPRNADADLLGFNQN-LKTSISDIQIFRKSVPQAQAGEN 320
            |::|:::.|::.||||||.|.::||.:.:..:.:::|.|.. |||:::.|::|||.:..|.||:|
Yeast   249 FLMPVEDIFSISGRGTVVTGRVERGNLKKGEELEIVGHNSTPLKTTVTGIEMFRKELDSAMAGDN 313

  Fly   321 VGALLRGIKISAVERGMLLCATGSEDISNHFEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNVP 385
            .|.|||||:...::|||:|...|:.........|:|:||:.||||.......|..|:|.:|    
Yeast   314 AGVLLRGIRRDQLKRGMVLAKPGTVKAHTKILASLYILSKEEGGRHSGFGENYRPQMFIRT---- 374

  Fly   386 ARIDIV---PSEA-----MLMPGEHGQVRVTLLRKMVMTPGQAFTIRENGATVATGMVTQ 437
            |.:.:|   |.|.     .:|||::.::...|:....:..||.|.|||.|.||.||::|:
Yeast   375 ADVTVVMRFPKEVEDHSMQVMPGDNVEMECDLIHPTPLEVGQRFNIREGGRTVGTGLITR 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 202/393 (51%)
EF_Tu 56..249 CDD:206671 129/193 (67%)
EFTU_II 257..343 CDD:293898 35/86 (41%)
mtEFTU_III 347..437 CDD:294005 31/97 (32%)
TUF1NP_014830.1 PRK00049 40..437 CDD:234596 204/405 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0050
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S366
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002097
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43721
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.820

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