DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu2 and EEFSEC

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_024309460.1 Gene:EEFSEC / 60678 HGNCID:24614 Length:647 Species:Homo sapiens


Alignment Length:370 Identity:91/370 - (24%)
Similarity:153/370 - (41%) Gaps:103/370 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NVGTIGHVDHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPEEKARGITINACHIGYSTTE---- 119
            |||.:||:|.|||.|..|::...|...         .|:.|:.:.||||::   :|:|...    
Human     9 NVGVLGHIDSGKTALARALSTTASTAA---------FDKQPQSRERGITLD---LGFSCFSVPLP 61

  Fly   120 ------------------------RTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMPQ 160
                                    ......||||||..|:.:|.||..:|..:||:..|.|...|
Human    62 ARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQ 126

  Fly   161 TREHLLLAKQVGIQRIIVFINKADLVD----QEVLELVEIEMREMLSDFGFDGVNSPVICGSALL 221
            :.|.|::. |:..|:::|.:||.||:.    |..::.:..:|::.|.:..|.|  :|:|..:|..
Human   127 SAECLVIG-QIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRG--APIIPVAAKP 188

  Fly   222 A---LREDKSEFGVPSIEKLLEQCDSYIPTPQRDISSPFILPIDNAFTVPGRGTVVVGTIKRGTI 283
            .   ..|.::..|:|   :|:|...|.|..|.||.|.||::.:|:.|::.|:|||:.|||..|:|
Human   189 GGPEAPETEAPQGIP---ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSI 250

  Fly   284 PRNADADLLGFNQNLKT------------------------------------------------ 300
            ......::....:|.:|                                                
Human   251 SLGDSVEIPALKKNSETWRVGPWPCFAGGPRPCAFSVVPALVQKSVPGPQTPLGWSSRCLQVVVV 315

  Fly   301 -SISDIQIFRKSVPQAQAGENVGALLRGIKISAVERGMLLCATGS 344
             .:..:|:|...:..|..|:.:|..:.......:||| |:||..|
Human   316 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPES 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 91/370 (25%)
EF_Tu 56..249 CDD:206671 60/224 (27%)
EFTU_II 257..343 CDD:293898 25/134 (19%)
mtEFTU_III 347..437 CDD:294005
EEFSECXP_024309460.1 SelB_euk 8..209 CDD:206676 58/217 (27%)
SelB_II 224..357 CDD:293897 24/133 (18%)
eSelB_III 362..501 CDD:294009
POLO_box <556..622 CDD:322131
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
21.870

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