Sequence 1: | NP_610288.1 | Gene: | mEFTu2 / 35681 | FlyBaseID: | FBgn0033184 | Length: | 456 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102789.1 | Gene: | Gspt2 / 501582 | RGDID: | 1563213 | Length: | 632 | Species: | Rattus norvegicus |
Alignment Length: | 492 | Identity: | 130/492 - (26%) |
---|---|---|---|
Similarity: | 196/492 - (39%) | Gaps: | 159/492 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 GLRELPHCNVGTIGHVDHGKTT-------LTAAITRIQSQKGLAE---------YLSYDQIDRAP 99
Fly 100 EEKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMP----- 159
Fly 160 --QTREHLLLAKQVGIQRIIVFINKAD--LVD--QEVLELVEIEMREMLSDFGFDGVNSP----- 213
Fly 214 -VICGSALLALREDKSEF-----GVPSIEKLLEQCDSYIPTPQRDISSPFILPIDNAFTVPGRGT 272
Fly 273 VVVGTIKRGTI---------PRNADADLLGFNQNLKTSISDIQIFRKSVPQAQA-----GENVGA 323
Fly 324 LLRGIKISAVERGMLLCATGSEDISNHFEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNVPARI 388
Fly 389 DIVPSEAMLMPGEHG---------QVRVTLLRKMV-------------------------MTPGQ 419
Fly 420 -------------AFTIRENGATVATGMVTQRLPSLD 443 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
mEFTu2 | NP_610288.1 | PRK00049 | 53..437 | CDD:234596 | 127/482 (26%) |
EF_Tu | 56..249 | CDD:206671 | 77/230 (33%) | ||
EFTU_II | 257..343 | CDD:293898 | 25/99 (25%) | ||
mtEFTU_III | 347..437 | CDD:294005 | 22/136 (16%) | ||
Gspt2 | NP_001102789.1 | PAM2 | 54..71 | CDD:284542 | |
TEF1 | 205..629 | CDD:227581 | 127/483 (26%) | ||
EF1_alpha | 209..425 | CDD:206670 | 75/225 (33%) | ||
eRF3_II | 434..514 | CDD:293906 | 24/97 (25%) | ||
eRF3_C_III | 521..627 | CDD:294003 | 22/122 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350780 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |