DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu2 and eEF1alpha2

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster


Alignment Length:452 Identity:112/452 - (24%)
Similarity:202/452 - (44%) Gaps:85/452 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RELPHCNVGTIGHVDHGKTTLTA------------AITRIQSQ-----KGLAEYLSYDQIDRAPE 100
            :|..|.|:..|||||.||:|.|.            .|.:.:.:     ||..:|...  :|:...
  Fly     3 KEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV--LDKLKA 65

  Fly   101 EKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMP------ 159
            |:.|||||:.....:.|::......|.|||.|:|||||:|.||.|.|:|:|||..|:..      
  Fly    66 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN 130

  Fly   160 -QTREHLLLAKQVGIQRIIVFINKADLVDQEVLELVEIEMREMLSDF----GFDGVNSPVI---- 215
             |||||.|||..:|::::||.:||.|..:....|....|:::.:|.:    |::..:...:    
  Fly   131 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPISG 195

  Fly   216 -CGSALLALREDKSEFGVPSIEK---------LLEQCDSYIPTPQRDISSPFILPIDNAFTVPGR 270
             .|..:|...|....|...|:|:         |::..|:.:| |||....|..||:.:.:.:.|.
  Fly   196 WHGDNMLEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILP-PQRPTDKPLRLPLQDVYKIGGI 259

  Fly   271 GTVVVGTIKRGTIPRNADADLLGFNQ-NLKTSISDIQIFRKSVPQAQAGENVGALLRGIKISAVE 334
            |||.||.::.|.:....   ::.|.. ||.|.:..:::..:::.:|..|:|||..::.:.:..:.
  Fly   260 GTVPVGRVETGLLKPGM---VVNFAPVNLVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELR 321

  Fly   335 RGMLLCATGSEDISNH-------FEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNVPARIDIVP 392
            ||.:     :.|..|:       |...:.:|:..  |::   .:.|...|...|.::..:...:.
  Fly   322 RGYV-----AGDSKNNPPRGAADFTAQVIVLNHP--GQI---ANGYTPVLDCHTAHIACKFSEIK 376

  Fly   393 SEAMLMPGEHGQVRVTLLRK-----MVMTPGQ--------------AFTIRENGATVATGMV 435
            .:.....|:..:.....::.     :|:.|.:              .|.:|:...|||.|::
  Fly   377 EKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 112/452 (25%)
EF_Tu 56..249 CDD:206671 70/234 (30%)
EFTU_II 257..343 CDD:293898 20/86 (23%)
mtEFTU_III 347..437 CDD:294005 16/115 (14%)
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 112/452 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464590
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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