DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu2 and mIF2

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster


Alignment Length:613 Identity:130/613 - (21%)
Similarity:211/613 - (34%) Gaps:239/613 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVRRISQALIGPGASQSRWTGTRLLATSADKNP-----------APGLREL--PHCNVGTI-GHV 66
            :::.|::.|   ||.      ||::||..:.|.           .|...||  |...|.|: |||
  Fly   116 IIQEIAKKL---GAK------TRVVATPEETNADEQKERDVAPRPPAAPELLQPRPPVVTVMGHV 171

  Fly    67 DHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPEEKARGITINACHIGYSTT-----ERTYAHTD 126
            |||||||      :.|.:|         .|.|..| |.|||   .|||..|.     ||. ...|
  Fly   172 DHGKTTL------LDSLRG---------ADVAAGE-AGGIT---QHIGAFTVTLENGERV-TFLD 216

  Fly   127 CPGHADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQRIIVFINKADLVDQEVL 191
            .||||.:......||...|..:|||||.||.|.||||.:.|||:..:. |||.:||.|..:..: 
  Fly   217 TPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVP-IIVALNKIDKPEANI- 279

  Fly   192 ELVEIEMREM---LSDFGFD----------GVN-----SPVICGSALLALREDKSEFGVPSIEKL 238
            |..:.|:.:|   |.:.|.|          |.|     ..|...:.|:.|:.|.:..    :|.:
  Fly   280 EKSKRELAQMGLALEEHGGDVQVIPISALKGTNLELLAEAVSTQATLMGLKADPTGL----VEGI 340

  Fly   239 LEQCDSYIPTPQRDISSPFILPIDNAFTVPGRG---TVVV--GTIKRGTI--------------- 283
            :.:                      :.|.|.||   |.:|  ||:::|::               
  Fly   341 VVE----------------------SKTDPRRGKLSTAIVSRGTLRKGSVLLSGLAHAKVRGLFD 383

  Fly   284 ---------PRNADADLLGF-------------------------------NQNLKTSISDIQ-- 306
                     |.....::||:                               .:.:::|..:|:  
  Fly   384 HNGQPLSEAPPGTPVEILGWRELPLAGDLILEVETEKKAHAVLKYREHESQQEKIESSSDEIRKK 448

  Fly   307 -------------------IFR-------KSVPQAQAGENVGALLRG------------------ 327
                               .||       |.|.:.:....|..:::|                  
  Fly   449 EEEHQAKYRAEREARRLAGRFRMRGGQRVKQVDENEGKPRVSVIIKGDVHGSVEAILDVLETYNS 513

  Fly   328 ---IKISAVERGMLLCATGSEDISNHFEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNV----- 384
               .::..|..|:.....|..:::..|...:|..:      |:....|..:::..:::|:     
  Fly   514 NESCRLDIVHYGVGNVTEGDLELAKAFHAIIYAFA------VETPQLKAAKEVNIRSYNIIYRLI 572

  Fly   385 ------------PARIDIVPSEAMLMPG---EHGQVRVTL----LRKMVMTPGQAFTIRENGATV 430
                        |..::.|..||.::..   ..|:..|.:    ..|.|:...|.|.:..:|..|
  Fly   573 DDLKEQLSSKLPPVEVEEVLGEANVLQNFLINEGRKEVPVAGCRCTKGVLKKAQKFRLLRDGEVV 637

  Fly   431 ATGMVTQRLPSLDLPKNKLS--KVFVDC 456
            ..|    .|.|:...||::.  |..|:|
  Fly   638 YDG----PLESMRHLKNEVDTIKKDVEC 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 113/542 (21%)
EF_Tu 56..249 CDD:206671 70/216 (32%)
EFTU_II 257..343 CDD:293898 22/194 (11%)
mtEFTU_III 347..437 CDD:294005 18/113 (16%)
mIF2NP_651621.2 InfB 158..689 CDD:223606 118/562 (21%)
IF2_eIF5B 163..327 CDD:206674 65/185 (35%)
IF2_mtIF2_II 336..431 CDD:293903 13/120 (11%)
IF-2 482..575 CDD:288813 10/98 (10%)
mtIF2_IVc 593..680 CDD:293893 18/73 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464599
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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