DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFTu2 and eef1a1a

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_956303.1 Gene:eef1a1a / 336334 ZFINID:ZDB-GENE-030131-8278 Length:462 Species:Danio rerio


Alignment Length:464 Identity:115/464 - (24%)
Similarity:200/464 - (43%) Gaps:109/464 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RELPHCNVGTIGHVDHGKTTLTA------------AITRIQSQ-----KGLAEYLSYDQIDRAPE 100
            :|..|.|:..|||||.||:|.|.            .|.:.:.:     ||..:|...  :|:...
Zfish     3 KEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWV--LDKLKA 65

  Fly   101 EKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMP------ 159
            |:.|||||:.....:.|::......|.|||.|:|||||:|.||.|.|:|:|||..|:..      
Zfish    66 ERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKN 130

  Fly   160 -QTREHLLLAKQVGIQRIIVFINKADLVD--------QEVLELVEIEMREMLSDFGFDGVNSPVI 215
             |||||.|||..:|::::||.:||.|..:        :|:::.|...::::       |.|...:
Zfish   131 GQTREHALLAYTLGVKQLIVGVNKMDSTEPSYSQKRYEEIVKEVSTYIKKI-------GYNPDTV 188

  Fly   216 C--------GSALLALREDKSEF---------GVPSIEKLLEQCDSYIPTPQRDISSPFILPIDN 263
            .        |..:|....:.|.|         |..:...|||..|:..| |.|....|..||:.:
Zfish   189 AFVPISGWNGDNMLEASPNMSWFKGWKITRKEGNAAGTTLLEALDAIQP-PTRPTDKPLRLPLQD 252

  Fly   264 AFTVPGRGTVVVGTIKRGTIPRNADADLLGFNQ-NLKTSISDIQIFRKSVPQAQAGENVGALLRG 327
            .:.:.|.|||.||.::.|.:....   ::.|.. |:.|.:..:::..:::.:|..|:|||..::.
Zfish   253 VYKIGGIGTVPVGRVETGLLKPGM---VVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKN 314

  Fly   328 IKISAVERGMLLCATGSEDISN-------HFEGSMYLLSRAEGGRVK----PMLSKYIQQLFSQT 381
            :.:..:.||.:     :.|..|       :|...:.:|:..  |::.    |:|..:...:..:.
Zfish   315 VSVKDIRRGNV-----AGDSKNDPPQEAANFTAQVIILNHP--GQISAGYAPVLDCHTAHIACKF 372

  Fly   382 WNVPARID------IVPSEAMLMPGEHGQVRVTLLRKMVMTPGQ--------------AFTIREN 426
            ..:..:||      :..:...|..|:...|.        |.||:              .|.:|:.
Zfish   373 AELKEKIDRRSGKKLEDNPKSLKSGDAAIVE--------MIPGKPMCVESFSEYPPLGRFAVRDM 429

  Fly   427 GATVATGMV 435
            ..|||.|::
Zfish   430 RQTVAVGVI 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 115/464 (25%)
EF_Tu 56..249 CDD:206671 71/241 (29%)
EFTU_II 257..343 CDD:293898 19/86 (22%)
mtEFTU_III 347..437 CDD:294005 20/120 (17%)
eef1a1aNP_956303.1 PTZ00141 1..460 CDD:185474 115/464 (25%)
EF1_alpha 9..238 CDD:206670 70/238 (29%)
EF1_alpha_II 242..332 CDD:293894 21/97 (22%)
EF1_alpha_III 336..438 CDD:294004 19/111 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592510
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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