DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFTu2 and eef1a1l1

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_571338.1 Gene:eef1a1l1 / 30516 ZFINID:ZDB-GENE-990415-52 Length:462 Species:Danio rerio


Alignment Length:461 Identity:116/461 - (25%)
Similarity:197/461 - (42%) Gaps:103/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RELPHCNVGTIGHVDHGKTTLTA------------AITRIQSQ-----KGLAEYLSYDQIDRAPE 100
            :|..|.|:..|||||.||:|.|.            .|.:.:.:     ||..:|...  :|:...
Zfish     3 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWV--LDKLKA 65

  Fly   101 EKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMP------ 159
            |:.|||||:.....:.|::......|.|||.|:|||||:|.||.|.|:|:||...|:..      
Zfish    66 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGVGEFEAGISKN 130

  Fly   160 -QTREHLLLAKQVGIQRIIVFINKADLVD----QEVLELVEIEMREMLSDFGFDGVNSPVI---- 215
             |||||.|||..:|::::||.:||.|..:    |...|.:..|:...:...|::..:...:    
Zfish   131 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSAYIKKIGYNPASVAFVPISG 195

  Fly   216 -CGSALLALREDKSEFGVPSIEK---------LLEQCDSYIPTPQRDISSPFILPIDNAFTVPGR 270
             .|..:|....:...|....||:         ||:..|:.:| |.|....|..||:.:.:.:.|.
Zfish   196 WHGDNMLEASSNMGWFKGWKIERKEGNASGTTLLDALDAILP-PSRPTDKPLRLPLQDVYKIGGI 259

  Fly   271 GTVVV-----GTIKRGTIPRNADADLLGFNQNLKTSISDIQIFRKSVPQAQAGENVGALLRGIKI 330
            |||.|     |.:|.|.:...|.|       |:.|.:..:::..:|:.:|..|:|||..::.:.:
Zfish   260 GTVPVGRVETGVLKPGMVVTFAPA-------NVTTEVKSVEMHHESLTEATPGDNVGFNVKNVSV 317

  Fly   331 SAVERGMLLCATGSEDISN-------HFEGSMYLLSRAEGGRVK----PMLSKYIQQLFSQTWNV 384
            ..:.||.:     :.|..|       :|...:.:|:..  |::.    |:|..:...:..:...:
Zfish   318 KDIRRGNV-----AGDSKNDPPMEAANFNAQVIILNHP--GQISQGYAPVLDCHTAHIACKFAEL 375

  Fly   385 PARID------IVPSEAMLMPGEHGQVRVTLLRKMVMTPGQ--------------AFTIRENGAT 429
            ..:||      :..:...|..|:...|.        |.||:              .|.:|:...|
Zfish   376 KEKIDRRSGKKLEDNPKALKSGDAAIVE--------MVPGKPMCVESFSTYPPLGRFAVRDMRQT 432

  Fly   430 VATGMV 435
            ||.|::
Zfish   433 VAVGVI 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 116/461 (25%)
EF_Tu 56..249 CDD:206671 69/234 (29%)
EFTU_II 257..343 CDD:293898 22/90 (24%)
mtEFTU_III 347..437 CDD:294005 20/120 (17%)
eef1a1l1NP_571338.1 PTZ00141 1..460 CDD:185474 116/461 (25%)
G1. /evidence=ECO:0000250 14..21 5/6 (83%)
G2. /evidence=ECO:0000250 70..74 3/3 (100%)
G3. /evidence=ECO:0000250 91..94 1/2 (50%)
G4. /evidence=ECO:0000250 153..156 2/2 (100%)
G5. /evidence=ECO:0000250 194..196 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592515
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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