DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFTu2 and EIF2S3B

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001344663.1 Gene:EIF2S3B / 255308 HGNCID:43863 Length:472 Species:Homo sapiens


Alignment Length:381 Identity:97/381 - (25%)
Similarity:151/381 - (39%) Gaps:108/381 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NVGTIGHVDHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPEEKARGITINACHIGYSTTE---- 119
            |:||||||.|||:|:..||:.:.:.             |...|..|.|||.   :||:..:    
Human    43 NIGTIGHVAHGKSTVVKAISGVHTV-------------RFKNELERNITIK---LGYANAKIYQL 91

  Fly   120 ------------------------------------RTYAHTDCPGHADYIKNMISGASQMDGAI 148
                                                |..:..|||||...:..|::||:.||.|:
Human    92 DDPSCPRPECYRSCGSSMPDEFPTDIPGTKGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAAL 156

  Fly   149 LVVAATDG-QMPQTREHLLLAKQVGIQRIIVFINKADLVDQEVLELVEIEMREMLSDF--GFDGV 210
            |::|..:. ..|||.|||...:.:.::.|::..||.|||.:...:    |..|.:..|  |....
Human   157 LLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKERQAK----EQYEQILAFVQGTVAE 217

  Fly   211 NSPVICGSALLALREDKSEFGVPSIEKLLEQCDSYIPTPQRDISSPFILPIDNAFTV--PG---- 269
            .:|:|..||.|..          :||.:.|.....||.|.||.:|...|.:..:|.|  ||    
Human   218 GAPIIPISAQLKY----------NIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVD 272

  Fly   270 --RGTVVVGTIKRGTIPRNADADLLGFNQNLKTSISDIQIFRKSV--------------PQAQAG 318
              :|.|..|:|.:|.:....:.::   ...:.:..|:.::..||:              ..|..|
Human   273 DLKGGVAGGSILKGVLKVGQETEV---RPGIVSKDSEGKLMCKSIFSKIVSLFAEHNDLQYAAPG 334

  Fly   319 ENVGALLRGIKIS----AVER--GMLLCATGS-EDISNHFEGSMYLLSRAEGGRVK 367
            ..:|.   |.||.    ..:|  |.:|.|.|: .:|....|.|.:||.|..|.|.:
Human   335 GLIGV---GTKIDPTLCRADRMVGQILGAVGALPEIFTELEISYFLLRRLLGVRTE 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 97/381 (25%)
EF_Tu 56..249 CDD:206671 61/232 (26%)
EFTU_II 257..343 CDD:293898 23/113 (20%)
mtEFTU_III 347..437 CDD:294005 8/21 (38%)
EIF2S3BNP_001344663.1 PTZ00327 13..466 CDD:240362 97/381 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156845
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.