DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu2 and tuf1

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_595746.1 Gene:tuf1 / 2540210 PomBaseID:SPBC9B6.04c Length:439 Species:Schizosaccharomyces pombe


Alignment Length:391 Identity:203/391 - (51%)
Similarity:290/391 - (74%) Gaps:3/391 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LRELPHCNVGTIGHVDHGKTTLTAAITRIQSQKGLAEYLSYDQIDRAPEEKARGITINACHIGYS 116
            :|:.||.|:||||||||||||||||||:..|..|.|.::.|.|||:|||||||||||::.|:.|.
pombe    48 VRKKPHVNIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVEYE 112

  Fly   117 TTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQRIIVFIN 181
            |..|.|||.|||||||||||||:||:.|||||:||:||||||||||||||||:|||:::|:|:||
pombe   113 TANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMPQTREHLLLARQVGVKQIVVYIN 177

  Fly   182 KADLVDQEVLELVEIEMREMLSDFGFDGVNSPVICGSALLALREDKSEFGVPSIEKLLEQCDSYI 246
            |.|:|:.:::||||:||||:||::||||.|:|::.||||.||...:.|.|:.||.||:|..||||
pombe   178 KVDMVEPDMIELVEMEMRELLSEYGFDGDNTPIVSGSALCALEGREPEIGLNSITKLMEAVDSYI 242

  Fly   247 PTPQRDISSPFILPIDNAFTVPGRGTVVVGTIKRGTIPRNADADLLGFNQNLKTSISDIQIFRKS 311
            ..|:|....||::.|::.|::.||||||.|.::|||:.:.|:.:::|:..:|||:::.|::|:|.
pombe   243 TLPERKTDVPFLMAIEDVFSISGRGTVVTGRVERGTLKKGAEIEIVGYGSHLKTTVTGIEMFKKQ 307

  Fly   312 VPQAQAGENVGALLRGIKISAVERGMLLCATGSEDISNHFEGSMYLLSRAEGGRVKPMLSKYIQQ 376
            :..|.||:|.|.|||.||...::|||::...|:......|:.|.|:|::.||||....:.||..|
pombe   308 LDAAVAGDNCGLLLRSIKREQLKRGMIVAQPGTVAPHQKFKASFYILTKEEGGRRTGFVDKYRPQ 372

  Fly   377 LFSQTWNVPARI---DIVPSEAMLMPGEHGQVRVTLLRKMVMTPGQAFTIRENGATVATGMVTQR 438
            |:|:|.:|...:   |...|:.|:|||::.::..||:..:|:..||.||:||.|:||.|.:||:.
pombe   373 LYSRTSDVTVELTHPDPNDSDKMVMPGDNVEMICTLIHPIVIEKGQRFTVREGGSTVGTALVTEL 437

  Fly   439 L 439
            |
pombe   438 L 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 201/386 (52%)
EF_Tu 56..249 CDD:206671 127/192 (66%)
EFTU_II 257..343 CDD:293898 34/85 (40%)
mtEFTU_III 347..437 CDD:294005 35/92 (38%)
tuf1NP_595746.1 PRK00049 42..439 CDD:234596 203/391 (52%)
EF_Tu 52..245 CDD:206671 127/192 (66%)
EFTU_II 253..339 CDD:293898 34/85 (40%)
EFTU_III 343..434 CDD:294006 34/90 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0050
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002097
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43721
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.870

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