DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu2 and GSPT2

DIOPT Version :9

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_060564.2 Gene:GSPT2 / 23708 HGNCID:4622 Length:628 Species:Homo sapiens


Alignment Length:491 Identity:131/491 - (26%)
Similarity:197/491 - (40%) Gaps:157/491 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GLRELPHCNVGTIGHVDHGKTT-------LTAAITRIQSQKGLAE---------YLSYDQIDRAP 99
            |..:..|.||..|||||.||:|       ||..:.:...:|...|         |||: .:|...
Human   197 GAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSW-ALDTNQ 260

  Fly   100 EEKARGITINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMP----- 159
            ||:.:|.|:......:.|..:.:...|.|||..::.|||.||||.|.|:||::|..|:..     
Human   261 EERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEK 325

  Fly   160 --QTREHLLLAKQVGIQRIIVFINKADLVDQEV---LELVEIEMREMLSDF----GFDGVNSP-- 213
              |||||.:|||..|::.:||.|||.|  |..|   :|..| |.:|.|..|    ||    ||  
Human   326 GGQTREHAMLAKTAGVKHLIVLINKMD--DPTVNWSIERYE-ECKEKLVPFLKKVGF----SPKK 383

  Fly   214 ----VICGSALLALREDKSEF-----GVPSIEKLLEQCDSYIPTPQRDISSPFILPIDNAFTVPG 269
                :.|.....|..:::|:|     |:|.|..|     ..:|...|.|..|..|||.:.:  ..
Human   384 DIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYL-----DNLPNFNRSIDGPIRLPIVDKY--KD 441

  Fly   270 RGTVVVGTIKRGTI---------PRNADADLLG-FNQNLKTSISDIQIFRKSVPQAQAGENVGAL 324
            .||||:|.::.|:|         |...:.::|| .:.:.:|..            ...|||:...
Human   442 MGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDF------------VAPGENLKIR 494

  Fly   325 LRGIKISAVERGMLLCATGSEDISNHFEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNVPARID 389
            |:||:...:..|.:||     |.||          ....||               |::|  :|.
Human   495 LKGIEEEEILPGFILC-----DPSN----------LCHSGR---------------TFDV--QIV 527

  Fly   390 IVPSEAMLMPGEHG---------QVRVTLLRKMV-------------------------MTPGQ- 419
            |:..::::.||.:.         :|.:|.|..:|                         .|.|. 
Human   528 IIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI 592

  Fly   420 ------------AFTIRENGATVATGMVTQRLPSLD 443
                        .||:|:.|.|:|.|.|.:.:|..|
Human   593 CLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 128/481 (27%)
EF_Tu 56..249 CDD:206671 77/233 (33%)
EFTU_II 257..343 CDD:293898 23/95 (24%)
mtEFTU_III 347..437 CDD:294005 24/136 (18%)
GSPT2NP_060564.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
PAM2 47..64 CDD:284542
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..124
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..195
TEF1 201..625 CDD:227581 128/482 (27%)
EF1_alpha 205..421 CDD:206670 75/228 (33%)
G1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 210..217 5/6 (83%)
G2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 266..270 2/3 (67%)
G3. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 287..290 1/2 (50%)
G4. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 349..352 2/2 (100%)
G5. /evidence=ECO:0000255|PROSITE-ProRule:PRU01059 391..393 0/1 (0%)
eRF3_II 430..511 CDD:293906 24/99 (24%)
eRF3_C_III 517..623 CDD:294003 22/122 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156849
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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