DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTu2 and HBS1

DIOPT Version :10

Sequence 1:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_652729.2 Gene:HBS1 / 117365 FlyBaseID:FBgn0042712 Length:670 Species:Drosophila melanogaster


Alignment Length:434 Identity:111/434 - (25%)
Similarity:188/434 - (43%) Gaps:65/434 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 HCNVGTIGHVDHGKTTLTAAI--------TRI------QSQK-GLAEYLSYDQIDRAPEEKARGI 106
            |.::..|||||.||:||...:        .|:      :|:| |...::....:|...||:||||
  Fly   247 HIHMIVIGHVDAGKSTLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERARGI 311

  Fly   107 TINACHIGYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMP-------QTREH 164
            |::.......|..:.....|.|||.|:|.||||||:|.|.|:|||.||.|:..       |||||
  Fly   312 TMDVGQSRIETKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQTREH 376

  Fly   165 LLLAKQVGIQRIIVFINKADLV--DQEVLELVEIEMREMLSDFGF---DGVNSPV--ICGSALLA 222
            .:|.:.:|:.::.|.|||.|.|  .|:....:..:::..|...||   |...:|.  :.|..|..
  Fly   377 AILVRSLGVNQLGVVINKLDTVGWSQDRFTEIVTKLKSFLKLAGFKDSDVSFTPCSGLTGENLTK 441

  Fly   223 LREDKSEFGVPSIEKLLEQCDSYIPTPQRDISSPFILPIDNAFTVPGRGTVVVGTIKRGTIPRNA 287
            ..::.:.....|...||:..::: ..|:|.|..|..:.:.:.:...|.|..:.|.::.|.:..| 
  Fly   442 KAQEPALTNWYSGRHLLDVIENF-KIPERAIDRPLRMSVSDIYKGTGSGFCISGRVETGVLCLN- 504

  Fly   288 DADLLGFNQNLKTSISDIQIFRKSVPQ--AQAGENVGALLRGIKISAVERGMLLCATGSE-DISN 349
            |..|:|.::. :..:..:.:  ...||  ..||:.|...|..:.|:.|..|.::....:. .::.
  Fly   505 DKVLVGASRE-QAQVKSLTM--NEFPQTCVFAGDQVSVTLPALDINNVTVGCIISDPQTPIPVTT 566

  Fly   350 HFEGSMYLLSRAEGGRVK-PMLSKYIQQLFSQTWNVPARIDIVPSEAMLMPGE--------HGQV 405
            .|:..:.:.:      || |:...:...|..|:...||.:..:.:......||        .|..
  Fly   567 RFQARIIVFN------VKVPITMGFPVLLHHQSLIEPAVVCKLTASIHKSTGEVVKKKPRCLGNN 625

  Fly   406 RVTLLRKMVMTP------------GQAFTIRENGATVATGMVTQ 437
            ...|:......|            |:.. :|..|.|:|.||||:
  Fly   626 SCALVELETSRPICIERYADFKELGRVM-LRVAGVTIAAGMVTK 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTu2NP_610288.1 TufA 53..436 CDD:439820 109/431 (25%)
HBS1NP_652729.2 HBS1_N 83..148 CDD:462642
TEF1 242..669 CDD:444074 111/434 (26%)
Blue background indicates that the domain is not in the aligned region.

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