DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and XIE

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_175858.1 Gene:XIE / 841898 AraportID:AT1G54560 Length:1529 Species:Arabidopsis thaliana


Alignment Length:1858 Identity:518/1858 - (27%)
Similarity:809/1858 - (43%) Gaps:438/1858 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAKIWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRNPAILVGQNDL 75
            |:.:|:..:|:.|....:|:...:.   :::...:||    |:.|..|.:.|....|...|.:|:
plant    13 GSHVWIEDSDVAWIDGLVEKINGQD---VEVQATNGK----KITAKLSKIYPKDMEAPAGGVDDM 70

  Fly    76 TTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMP-LYGPSIIRAYRGHAMGDLEPH 139
            |.||||||||||.||::|: |...||||.|.||:||||:..:| :|...:::.|:|...|:|.||
plant    71 TKLSYLHEPGVLQNLKIRY-ELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPH 134

  Fly   140 IFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGG---SESETQVERKVLASS 201
            :||:|:.||..:..|..:.||:||||||||||.:.|..|||.|.:||   :|..| ||::||.|:
plant   135 VFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAVTEGRT-VEQQVLESN 198

  Fly   202 PIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYHIF 266
            |::||||||||.||:||||||||.::.|..|..:   .||.:.|||||:|||...:..|||||.|
plant   199 PVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRI---SGAAVRTYLLERSRVCQISDPERNYHCF 260

  Fly   267 YQLCAA-RSKYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQIADIVKI 330
            |.|||| :.:..:..|.|...|.:||.....|:..:|||..:..|.:||.::|.|.::...|.::
plant   261 YLLCAAPQEELEKYKLGHPKTFHYLNQSKCFELVGISDAHDYIATRRAMDIVGMSEKEQEAIFRV 325

  Fly   331 LAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMRKIESVNE 395
            :|.||||||::    |.:|.|.:.|...| ..:..||...|:||......|...|..|.:.:..|
plant   326 VAAILHLGNVE----FTKGKEVDSSVPKD-DKSKFHLNTVAELLMCDVKALEDALCKRVMVTPEE 385

  Fly   396 YVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDIYGFETFEVNSFE 460
            .:......::|..:||.|||.||::||.::|..:|.|:...:...|.||||||||||:|:.||||
plant   386 VIKRSLDPQSALISRDGLAKTIYSRLFDWLVEKINVSIGQDATSRSLIGVLDIYGFESFKTNSFE 450

  Fly   461 QFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRL-GVLDLLDEECR 524
            |||||:.||||||.|||||||:|||||.||.|.|:.|:|.|||..:||||.:. |::.||||.|.
plant   451 QFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACM 515

  Fly   525 MPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFLEKNRDTVSKELTQVL 589
            .||.:.|::|.||.........|.||:...|.|.:.|::..|:|..:.||:||:|.|..|...:|
plant   516 FPKSTHETFANKLYQTFKTHKRFIKPKLSRTDFAVAHYAGEVQYQSDLFLDKNKDYVIPEHQDLL 580

  Fly   590 SESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVVPSKQHRKTVGSQF 654
            ..|     |....:.....|..:::|||..                            .::||:|
plant   581 GAS-----KCPFVVGLFPPLPEETSKSSKF----------------------------SSIGSRF 612

  Fly   655 QESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAAGFPSRWLYP 719
            :..|..|:.||::|.|||:||:|||:......:|...|:||||..||||.:|||.||:|:|..:.
plant   613 KLQLQQLMETLNSTEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRKPFF 677

  Fly   720 DFYMRYQLLVYRSKLDKNDMKLSCR----NIVMKWIQDEDKYRFGNTQIFFRAGQVAFLEQVRAN 780
            :|..|:.||..|:.....:.|.:.:    ||.:|      .|:.|.|::|.||||:|.|:..|..
plant   678 EFINRFGLLYPRALEGNYEEKAAAQKILDNIGLK------GYQVGKTKVFLRAGQMAELDARRTM 736

  Fly   781 LRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLILSKYARGWL 845
            :.......:|..:|....:|:|:.::|....:|...||.|:.:....:|...|.:.:.|.||...
plant   737 VLSAAAKKIQRRIRTHQAQRRFILLRKATISLQALCRGRLSSKIFDNLRRQAAAVKIQKNARRLH 801

  Fly   846 CRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALARRAYQKRRRNIIICQA 910
            .|:.|..|..:...:||..|.|.|..:|...:....|..||...|...|...::|.::.:|:.|.
plant   802 SRKSYKNLHVAALVVQTGLRAMAAHKQFRFRKQTKAATTIQAQFRCHRATLYFKKLKKGVILSQT 866

  Fly   911 AIRRFLARRKFKRMKAEAKTISHMENKYMGLENKIISMQQRIDELNRDNSNLKHKTSEISVLKMK 975
            ..|..||||:.:::|..::                                      |...||  
plant   867 RWRGKLARRELRQLKMASR--------------------------------------ETGALK-- 891

  Fly   976 LELKKTLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHAQEEWISQKQTWRQENE 1040
             |.|..||              |.:|.|..:.:.|:..::.|.||..  ||  |.:.|:   ..|
plant   892 -EAKDMLE--------------KKVEELTYRAQLEKRSRVDLEEEKN--QE--IKKLQS---SLE 934

  Fly  1041 ELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENENFMLKEELSRLT 1105
            |:|:::||    .....|.:|                ||.::||::...:..|..:|.|:..::.
plant   935 EMRKKVDE----TNGLLVKER----------------EAAKKAIEEAPPVVTETQVLVEDTQKIE 979

  Fly  1106 AGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSKNYSYNDSTSLVVKLRSILEEEKQ 1170
            |                                               .|..|..|::.||:|||
plant   980 A-----------------------------------------------LTEEVEGLKANLEQEKQ 997

  Fly  1171 KHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSI---KHGVEINELNAQHAAL 1232
            :                 .:|:.|             ::|:.:.|.   |..:|..|..||.  |
plant   998 R-----------------ADDATR-------------KFDEAQESSEDRKKKLEDTEKKAQQ--L 1030

  Fly  1233 QEEVRRRREECIQLKA---VLLQQSQSMR-----SLEPESLQMRGNDVNEL-MEA-----FHSQK 1283
            ||.|.|..|:|..|::   ||.||:.|:.     |....|:..||::...| ::|     .||..
plant  1031 QESVTRLEEKCNNLESENKVLRQQAVSIAPNKFLSGRSRSILQRGSESGHLSVDARPSLDLHSHS 1095

  Fly  1284 LINRQLESELKAITEEHNSKLVEMTQEIERL-----------NNEKDELQKVMFESI---DEFE- 1333
             |||:   :|..:.::....|.|..||.:.|           ..::.....::::.:   ..|| 
plant  1096 -INRR---DLSEVDDKPQKSLNEKQQENQELLIRCIVQHLGFQGKRPVTACIIYKCLLQWRSFEV 1156

  Fly  1334 ------DSNVDTLRQ------NDRYLRRELQKAVAQFLLVQEELKLANAKLKAYRQDGGQLEHKI 1386
                  |..:.|:.|      |:..|...|..|....||:|..||.:.|                
plant  1157 ERTSVFDRIIQTIGQAIETQDNNNILAYWLSNASTLLLLLQRTLKASGA---------------- 1205

  Fly  1387 EEEMIRNKSNGTSADVGANVTKQKSQNPQGLMKFHSSDLDKILQRLLSALTPRTVVGLLPGFPAY 1451
             ..|...:...:||.:...:|:.....|||                                   
plant  1206 -AGMAPQRRRSSSATLFGRMTQSFRGTPQG----------------------------------- 1234

  Fly  1452 LIFMCIRYTDLTNADDDVRELLSKFVIQIKKMHRTPHPIENRVIWLVNSITLLNLMKQYGDVDEY 1516
                 :....:....|.:|::.:|:...:.|...|.:                 :.|.||    .
plant  1235 -----VNLAMINGGVDTLRQVEAKYPALLFKQQLTAY-----------------VEKIYG----M 1273

  Fly  1517 VKFNTEKQNQQQLKNFNLFEYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDEIQRGRQAH 1581
            ::.|.:|:                            |..:.||.             ||..|   
plant  1274 IRDNLKKE----------------------------ISPLLGLC-------------IQAPR--- 1294

  Fly  1582 GMRSRATSI-GASSSPEHGGGPA--------WKQLIGQLEHFYKQFQHFGLDNCYAEQIFHQLLY 1637
              .|||:.: |||.|.   |..|        |:.::..|.:|....:...:......::|.|:..
plant  1295 --TSRASLVKGASRSV---GNTAAQQALIAHWQGIVKSLTNFLNNLKSNHVPPFLVRKVFTQIFS 1354

  Fly  1638 FICAVALNCLMLRGDICMWETGMIIRYNIGCIEDWV--RSKKMSNDVLTALAPLNQ-VSQLLQSR 1699
            ||.....|.|:||.:.|.:..|..::..:..:|.|.  .:.:.:......|..:.| :..|:..:
plant  1355 FINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYNATDEYAGSSWDELKHIRQAIGFLVIHQ 1419

  Fly  1700 KSEQDVQTIC-DLCTSLSTAQVLKVMKSYKLDDYESE------ITNVFLEKLTEKLNARQMQKSN 1757
            |.::.:..|. :||..||..|:.::...|..|.|.:.      |.|:.: .:||..|     .:.
plant  1420 KPKKTLDEISHELCPVLSIQQLYRISTMYWDDKYGTHSVSPDVIANMRV-LMTEDSN-----NAV 1478

  Fly  1758 SDEFTIDQKFIQPFKVVFRYSD-------IKLEDIELP 1788
            |:.|.:|.....||.|    .|       |::.|:|.|
plant  1479 SNSFLLDDDSSIPFSV----DDLSKSMERIEIGDVEPP 1512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580 298/722 (41%)
MYSc_Myo5 84..767 CDD:276831 282/692 (41%)
IQ 900..922 CDD:197470 8/21 (38%)
GBP_C <971..1086 CDD:303769 28/114 (25%)
coiled coil 1049..1068 CDD:293879 2/18 (11%)
coiled coil 1077..1086 CDD:293879 4/8 (50%)
JAKMIP_CC3 <1190..1299 CDD:292653 34/125 (27%)
Myo5_CBD 1424..1792 CDD:271254 69/391 (18%)
XIENP_175858.1 Myosin_N 14..51 CDD:280832 7/43 (16%)
MYSc 66..734 CDD:214580 297/716 (41%)
MYSc_Myo11 79..723 CDD:276835 282/692 (41%)
type_I_hlyD 723..>980 CDD:130902 76/338 (22%)
ApoLp-III_like <889..1026 CDD:304399 47/257 (18%)
TPR_MLP1_2 907..1054 CDD:285204 50/252 (20%)
bZIP <1016..1052 CDD:304365 14/37 (38%)
MyosinXI_CBD 1114..1495 CDD:271259 90/517 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20100
Inparanoid 1 1.050 659 1.000 Inparanoid score I160
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - otm2587
orthoMCL 1 0.900 - - OOG6_100101
Panther 1 1.100 - - O PTHR13140
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X244
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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