DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and VIIIA

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_175453.2 Gene:VIIIA / 841458 AraportID:AT1G50360 Length:1153 Species:Arabidopsis thaliana


Alignment Length:1144 Identity:386/1144 - (33%)
Similarity:584/1144 - (51%) Gaps:176/1144 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEEMLYAQG--AKIWVPHADLVWE-----SATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDL 60
            |:..:||:.  .:.||...:..||     |.:.|||.        |....||:    ||.....|
plant    96 SDTNVYARKKVLQFWVQLPNGNWELGKIMSTSGEESV--------IVVTEGKV----LKVKSETL 148

  Fly    61 PPLRNPAILVGQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSII 125
            .| .||.||.|.:||..||||:||.||:||..|: .:.:|||..|.:|||:||:.|:||||...|
plant   149 VP-ANPDILDGVDDLMQLSYLNEPAVLYNLEYRY-NQDMIYTKAGPVLVAVNPFKEVPLYGNRNI 211

  Fly   126 RAYRGHAMGDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESE 190
            .|||..:  :..||::|:|:.|..::.|:..|.|||:|||||||||.:||.||:|.||:||... 
plant   212 EAYRKRS--NESPHVYAIADTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSG- 273

  Fly   191 TQVERKVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVY 255
              :|.::|.::||:||||||||.||||||||||..::.| ::.|.  :.||.:.|:||||||||.
plant   274 --IEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHF-SETGK--ISGAQIQTFLLEKSRVVQ 333

  Fly   256 QAQGERNYHIFYQLCAARSK--YPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLG 318
            ..:|||:|||||||||..|.  ..:|.|....::.:|.......|..|.|||:|:...:|:.::.
plant   334 CTEGERSYHIFYQLCAGASPTLREKLNLTSAKQYNYLKQSNCYSINGVDDAERFHAVKEALDIVH 398

  Fly   319 FSIQQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRR 383
            .|.:...::..:||.:|.|||:..:...||...|.:.|.        .|...|.|:..:.::|:.
plant   399 VSKEDQENVFAMLAAVLWLGNVSFTIIDNENHVEPEPDE--------SLSTVAKLIGCNINELKL 455

  Fly   384 WLLMRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCS-FIGVLD 447
            .|..|.:...|:.::...::..|..|||||||.|||.||.::|..:||||..|.::.. .|.:||
plant   456 ALSKRNMRVNNDTIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILD 520

  Fly   448 IYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESR 512
            |||||:|..|||||||||||||:|||.||:|:||||||||:::||.||.:||.|||.|:.|.|.:
plant   521 IYGFESFNKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTRVDFEDNQECLSLFEKK 585

  Fly   513 -LGVLDLLDEECRMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFLEK 576
             ||:|.|||||...|.|:|.:.|.||....|....|...|  ..:|.:.|::..|.|:..|||||
plant   586 PLGLLSLLDEESTFPNGTDLTLANKLKQHLNDNSCFRGDR--GKAFTVAHYAGEVTYETTGFLEK 648

  Fly   577 NRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVV 641
            |||.:..:..|:||..:..|.:...:     ::.:.|.|.       ::....|..|.|::    
plant   649 NRDLLHSDSIQLLSSCSCHLPQAFAS-----SMLIYSEKP-------LVGPLHKAGGADSQ---- 697

  Fly   642 PSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVR 706
                 |.:|.::|:..|..|:..|..||||::||||||:.:.|..:|...::||||.|||||.||
plant   698 -----RLSVATKFKGQLFQLMQRLGNTTPHFIRCIKPNNVQSAGLYEQGLVLQQLRCCGVLEVVR 757

  Fly   707 ISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCR-----NIVMKWIQDEDKYRFGNTQIFF 766
            ||.:|||:|..:..|..||..|:..:...|:.:.:|..     ||:      .:.|:.|.|::||
plant   758 ISRSGFPTRMFHHKFARRYGFLLLENIAAKDPLSVSVAILHQFNIL------PEMYQVGYTKLFF 816

  Fly   767 RAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGI---QKHARGYLARERTQKM 828
            |.||:..||..|                           .:.::||   |.:.||:.||.|   :
plant   817 RTGQIGVLEDTR---------------------------NRTLHGILRLQSYFRGHQARCR---L 851

  Fly   829 REARAGL-ILSKYARGWLCRRRYLRL--RHSIS-GIQTYARGMLARNKFHAMRDHYRAVQIQRFV 889
            :|.:.|: ||..:.||...|:.|..|  ||..| .||::.:..:|..::.|..|  .:..||..:
plant   852 KELKTGITILQSFVRGEKMRKEYTELLQRHRASAAIQSHVKRRIASQQYKATVD--ASAVIQSAI 914

  Fly   890 RGALARR-----------AYQKRRRNIIICQAAIRRFLARRKFK-----RMKAE-----AKTISH 933
            ||.|.||           ..::...:.::.:|:....|.||..:     |.|.|     .:.:..
plant   915 RGELVRRCAGDIGWLSSGGTKRNESDEVLVKASYLSDLQRRVLRTEAALREKEEENDILRQRVQQ 979

  Fly   934 MENKYMGLENKIISMQQRIDELNRDNSNLKHKTSEISVLKMKLELKKTLEAEFKNVKAA-CQDKD 997
            .:|::...|.|:.||::...:      .:|...|.:|:.|..||::.:......:|.|: ..|.|
plant   980 YDNRWSEYETKMKSMEEIWQK------QMKSLQSSLSIAKKSLEVEDSARNSDASVNASDATDLD 1038

  Fly   998 ------------------------KLIEALNKQLEAERDEKMQLL-------EENGHAQEEWISQ 1031
                                    :|.|...::.:...|::..|:       |.|.:...|....
plant  1039 SGGSHYQMGHGRSRSVGVGLSVISRLAEEFGQRAQVFGDDRKFLMEVKSGQVEANLNPDRELRRL 1103

  Fly  1032 KQ---TWRQENEELRRQIDEIIDMAKNAEVNQRNQEDRM 1067
            ||   ||:::.....|:...|:....:.|.....::.:|
plant  1104 KQMFETWKKDYGGRLRETKLILSKLGSEETGGSAEKVKM 1142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580 298/721 (41%)
MYSc_Myo5 84..767 CDD:276831 280/691 (41%)
IQ 900..922 CDD:197470 4/21 (19%)
GBP_C <971..1086 CDD:303769 22/132 (17%)
coiled coil 1049..1068 CDD:293879 3/19 (16%)
coiled coil 1077..1086 CDD:293879
JAKMIP_CC3 <1190..1299 CDD:292653
Myo5_CBD 1424..1792 CDD:271254
VIIIANP_175453.2 MYSc_Myo8 171..817 CDD:276834 280/691 (41%)
MAD 848..>1029 CDD:368498 44/191 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - otm2587
orthoMCL 1 0.900 - - OOG6_100101
Panther 1 1.100 - - O PTHR13140
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

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