DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and MYA2

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_001190465.1 Gene:MYA2 / 834412 AraportID:AT5G43900 Length:1565 Species:Arabidopsis thaliana


Alignment Length:1812 Identity:517/1812 - (28%)
Similarity:805/1812 - (44%) Gaps:396/1812 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAKIWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRNPAILVGQNDL 75
            |:.:||...|..|...   |..:.....:|:...|||....|:    |:..|....|...|.:|:
plant    70 GSFVWVEDPDEAWIDG---EVVQVNGDEIKVLCTSGKHVVTKI----SNAYPKDVEAPASGVDDM 127

  Fly    76 TTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMP-LYGPSIIRAYRGHAMGDLEPH 139
            |.|:||||||||.||..|: :...||||.|.||:|:||:..:| ||...::..|:|.::|:|.||
plant   128 TRLAYLHEPGVLQNLHSRY-DINEIYTYTGSILIAVNPFRRLPHLYSSHMMAQYKGASLGELSPH 191

  Fly   140 IFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGG--SESETQVERKVLASSP 202
            .||:|:.||.::..:..:.||:||||||||||.|.|..|||.|.:||  :.....||:|||.|:|
plant   192 PFAVADAAYRQMINDGVSQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRSVEQKVLESNP 256

  Fly   203 IMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYHIFY 267
            ::||||||||.||:||||||||.::.| ::.|  .:.||.:.|||||:|||...:..|||||.||
plant   257 VLEAFGNAKTVRNNNSSRFGKFVEIQF-DEKG--RISGAAIRTYLLERSRVCQVSDPERNYHCFY 318

  Fly   268 QLCAA-RSKYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQIADIVKIL 331
            .|||| :....:..|:...|:.:||.....|::.::|||:::.|.:||.|:|.|.::...|..::
plant   319 MLCAAPQEDVKKFKLEEPKKYHYLNQSKCLELDSINDAEEYHATRRAMDVVGISTEEQDAIFSVV 383

  Fly   332 AGILHLGNIQVSKKFNEGSEEEDS----DSCDIFHNDIHLQITADLL----RVSADDLRRWLLMR 388
            |.|||:|||:.:|     .||.||    |...:|    ||:..|:||    :...|.|.:.:::.
plant   384 AAILHIGNIEFAK-----GEEIDSSIPKDDKSLF----HLKTAAELLSCDEKALEDSLCKRIMVT 439

  Fly   389 KIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDIYGFET 453
            :.|::.: .|.|   |||..:||||||.:|::||.::|..:|.|:.........||||||||||:
plant   440 RDETITK-TLDP---EAATLSRDALAKVMYSRLFDWLVDKINSSIGQDHDSKYLIGVLDIYGFES 500

  Fly   454 FEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRL-GVLD 517
            |:.|||||||||..||||||.|||||||:|||||.||.|.|:.|:|.|||..:||||.:. |::.
plant   501 FKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEINWSYIEFVDNQDILDLIEKKPGGIIA 565

  Fly   518 LLDEECRMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFLEKNRDTVS 582
            ||||.|..|:.:.|::|.||.........|.||:...:.|.|.|::..|.|....||:||:|.|.
plant   566 LLDEACMFPRSTHETFAQKLYQTFKTHKRFTKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVI 630

  Fly   583 KELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVVPSKQHR 647
            .|...:|:.|:.|....:......|                                   |||.:
plant   631 AEHQALLNSSSCSFVASLFPPMSDD-----------------------------------SKQSK 660

  Fly   648 -KTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAAG 711
             .::|::|::.|.||:..|:.|.|||:||||||:......:|...|:||||..||:|.:|||.||
plant   661 FSSIGTRFKQQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENENILQQLRCGGVMEAIRISCAG 725

  Fly   712 FPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKWIQDEDK-----YRFGNTQIFFRAGQV 771
            :|:|..:.:|..|:.:|.....:..:|...:|:.::       ||     |:.|.|::|.||||:
plant   726 YPTRKHFDEFLARFGILAPEVLVKNSDDPAACKKLL-------DKVGLEGYQIGKTKVFLRAGQM 783

  Fly   772 AFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLI 836
            |.|:..|..:..:..:|:|..||.::.::.|:.::.....||...||||||...:.||...|.|.
plant   784 ADLDTRRTEVLGRSASIIQRKVRSYLAKKSFIVLRNSAKQIQSVCRGYLARSVYEGMRREAAALK 848

  Fly   837 LSKYARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALARRAYQKR 901
            :.:..|.:|.|:.|..|..:...:|...|||:||.:....|....|:.||.:.||.|||..|:|.
plant   849 IQRDLRRFLARKAYTELYSAAVSVQAGMRGMVARKELCFRRQTKAAIIIQTWCRGYLARLHYRKL 913

  Fly   902 RRNIIICQAAIRRFLARRKFKRMKAEAKTISHMENKYMGLENKIISMQQRIDELNRDNSNLKHKT 966
            ::..|..|.|.|..:||.:.:::|..|:....::    ..:||   ::::::||.          
plant   914 KKAAITTQCAWRSKVARGELRKLKMAARETGALQ----AAKNK---LEKQVEELT---------- 961

  Fly   967 SEISVLKMKLELKKTLEAEFKNVKAACQDKDKLIEALNK-QLEAERDEKMQLLEENGHAQEEWIS 1030
                   .:|:|:|.:..:.:..|.  |:..|...:|.: ||:.:..|.:.:.|           
plant   962 -------WRLQLEKRIRTDLEEAKK--QESAKAQSSLEELQLKCKETEALLIKE----------- 1006

  Fly  1031 QKQTWRQENEELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENENF 1095
                     .|..::|.|...:.|  |:...:||                   :.||  |.|||.
plant  1007 ---------REAAKKIAETAPIIK--EIPVVDQE-------------------LMDK--ITNENE 1039

  Fly  1096 MLKEELSRLTAGSFSLHARKASNASSQNEDDVGYASAK--NTLDINRPPDLLSKNYSYNDSTSLV 1158
            .||..:|.|                   |..:|....|  .|..|::  |.|::..   ::.|.:
plant  1040 KLKSMVSSL-------------------EMKIGETEKKLQETTKISQ--DRLNQAL---EAESKL 1080

  Fly  1159 VKLRS--------ILEEEKQKHKVLQEQYIKLSSR----HKPTEDSFRVSELEVENE-KLRSEYD 1210
            |||::        ||:.|.:| |::.:|.|....|    |.||..   |..||..:: .|..|::
plant  1081 VKLKTAMQRLEEKILDMEAEK-KIMHQQTISTPVRTNLGHPPTAP---VKNLENGHQTNLEKEFN 1141

  Fly  1211 QLR-TSIKHGVEINELNAQHAALQEEVRRRREECIQLKAVL--LQQSQSMRSLEPESLQMRGNDV 1272
            :.. |:...|      .|..:|.:.::       :.:.|::  ::.:....:.:|          
plant  1142 EAEFTTPVDG------KAGKSAAERQI-------MNVDALIDCVKDNIGFSNGKP---------- 1183

  Fly  1273 NELMEAFHSQKLIN--RQLESELKAITEEHNSKLVEMTQEIERLNNEKDELQKVMFESIDEFEDS 1335
               :.||...|.:.  :..||              |.|...:||      :|  |..|..|.||.
plant  1184 ---VAAFTIYKCLLHWKCFES--------------EKTNVFDRL------IQ--MIGSAIENEDD 1223

  Fly  1336 NVDTLRQNDRYLRRELQKAVAQFLLVQEELKLANAKLKAYRQDGGQLEHKIEEEMIRNKSNGTSA 1400
            |        .:|...|....|...|:|:.|                            |:||:.|
plant  1224 N--------SHLAYWLTSTSALLFLLQKSL----------------------------KTNGSGA 1252

  Fly  1401 DVGANVTKQKSQNPQGLMKFHSSDLDKILQRLLSALTPRTVVGLLPGFPAYLIFMCIRYTDLTNA 1465
            ..........|...:..|.|.||.....|.....|.....|..:...:||.|.            
plant  1253 TQSKKPPASTSLFGRMAMSFRSSPASGNLAAAAEAAALAVVRPVEAKYPALLF------------ 1305

  Fly  1466 DDDVRELLSKFVIQIKKMHRTPHPIENRVIWLVNSITLLNLMKQYGDVDEYVKFNTEKQNQQQLK 1530
                ::.|:.:|                             .|.:|.|.:               
plant  1306 ----KQQLAAYV-----------------------------EKMFGMVRD--------------- 1322

  Fly  1531 NFNLFEYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDEIQRGRQAH-GMRSRATSIGASS 1594
              ||......:|.|.                            ||..|.:. ||.....|.|..|
plant  1323 --NLKRELSTLLSLC----------------------------IQAPRSSKGGMLRSGRSFGKDS 1357

  Fly  1595 SPEHGGGPAWKQLIGQLEHFYKQFQHFGLDNCYAEQIFHQLLYFICAVALNCLMLRGDICMWETG 1659
            ...|     |:.:|..|.......:...:.....::|:.|...:|.....|.|:||.:.|.:..|
plant  1358 PAVH-----WQSIIDGLNSLLVTLKENHVPLVLIQKIYSQTFSYINVQLFNSLLLRKECCTFSNG 1417

  Fly  1660 MIIRYNIGCIEDW-VRSKKMSNDVLTALAPLNQ-VSQLLQSRKSEQDVQTIC-DLCTSLSTAQVL 1721
            ..::..:..:|.| .::|:.|......|..:.| |..|:..:|.......|. |||..||..|:.
plant  1418 EFVKSGLAELELWCCQAKEYSGPSWEELKHIRQAVGFLVIHQKYRISYDEIANDLCPVLSVQQLY 1482

  Fly  1722 KVMKSYKLDDYES-----EITNVFLEKLTEKLNARQMQKSNSDEFTIDQKFIQPFKV 1773
            ::...|..|.|.:     |:.:.....:||:.|     .::||.|.:|.....||.:
plant  1483 RICTLYWDDSYNTRSVSQEVISSMRTLMTEESN-----DADSDSFLLDDDSSIPFSI 1534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580 295/731 (40%)
MYSc_Myo5 84..767 CDD:276831 280/701 (40%)
IQ 900..922 CDD:197470 7/21 (33%)
GBP_C <971..1086 CDD:303769 18/115 (16%)
coiled coil 1049..1068 CDD:293879 4/18 (22%)
coiled coil 1077..1086 CDD:293879 0/8 (0%)
JAKMIP_CC3 <1190..1299 CDD:292653 16/114 (14%)
Myo5_CBD 1424..1792 CDD:271254 65/359 (18%)
MYA2NP_001190465.1 Myosin_N 73..108 CDD:280832 9/37 (24%)
MYSc 117..790 CDD:214580 295/731 (40%)
MYSc_Myo11 136..779 CDD:276835 280/701 (40%)
IQ 889..911 CDD:197470 9/21 (43%)
RILP-like 964..1083 CDD:304877 37/187 (20%)
MyosinXI_CBD 1159..1535 CDD:271259 98/554 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 659 1.000 Inparanoid score I160
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - otm2587
orthoMCL 1 0.900 - - OOG6_100101
Panther 1 1.100 - - O PTHR13140
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X244
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.830

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