DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and XIK

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_001318612.1 Gene:XIK / 832171 AraportID:AT5G20490 Length:1531 Species:Arabidopsis thaliana


Alignment Length:1857 Identity:518/1857 - (27%)
Similarity:804/1857 - (43%) Gaps:435/1857 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAKIWVPHADLVWESATL-----EESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRNPAILV 70
            |:.:|:......|....:     ||.:..        |.:||    .:.|:.:::.|....|...
plant    10 GSHVWIEDPGAAWIDGEVVKINGEEVHAH--------TTNGK----TVVANIANVFPKDTEAPPG 62

  Fly    71 GQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMP-LYGPSIIRAYRGHAMG 134
            |.:|:|.||||||||||:||.:|: |...||||.|.||:|:||:..:| ||...::..|:|...|
plant    63 GVDDMTKLSYLHEPGVLNNLAMRY-ELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAGFG 126

  Fly   135 DLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGS---ESETQVERK 196
            :|.||:||:||.||..:..|..:.||:||||||||||.:.|..|||.|.:||.   |..| ||::
plant   127 ELSPHVFAIAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT-VEQQ 190

  Fly   197 VLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGER 261
            ||.|:|::||||||||.||:||||||||.:|.|.|   ...:.||.:.|||||:|||...:..||
plant   191 VLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDN---CGRISGAAVRTYLLERSRVCQISDPER 252

  Fly   262 NYHIFYQLCAA----RSKY----PELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLG 318
            |||.||.||||    |.|:    |:|       |.:||.....:::.|.|.|::..|.:||.::|
plant   253 NYHCFYLLCAAPPEEREKFKLGDPKL-------FHYLNQSKCYKLDGVDDTEEYLATRRAMDIVG 310

  Fly   319 FSIQQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRR 383
            .|.::...|.:::|.||||||:..:|     .:|.||.......:..||.:.|:|||..|..:..
plant   311 ISEEEQDAIFRVVAAILHLGNVNFAK-----GKEIDSSVLKDEKSRYHLDVCAELLRCDAKKMED 370

  Fly   384 WLLMRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDI 448
            .|:.|.:.:..|.:......::|..:||||||.||::||.::|..:|.|:.......:.||||||
plant   371 ALIKRVMVTPEEVITRTLDPDSATGSRDALAKTIYSRLFDWLVDKINNSIGQDPNSKTIIGVLDI 435

  Fly   449 YGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRL 513
            ||||:|::|||||||||:.||||||.|||||||:|||:|.||.|.|:.|:|.||:..::|||.:.
plant   436 YGFESFKINSFEQFCINFTNEKLQQHFNQHVFKMEQEDYTKEEINWSYIEFVDNKDVLELIEKKP 500

  Fly   514 -GVLDLLDEECRMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFLEKN 577
             ||:.||||.|..||.:.|::|.||......:..|.||:...|||.|.|::..|.|..:.||:||
plant   501 GGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPKLSRTSFAISHYAGEVTYQADLFLDKN 565

  Fly   578 RDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVVP 642
            :|.|..|...:|..|:             ||..                ||...:        :|
plant   566 KDYVVAEHQDLLIASS-------------DTFV----------------AGLFPR--------LP 593

  Fly   643 SKQHRKT----VGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLE 703
            .:...||    :||:|:..|.||:.||.:|.|||:||:|||:......:|...:|||||..||||
plant   594 EETSSKTKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENVNVIQQLRCGGVLE 658

  Fly   704 TVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKWIQDEDK-----YRFGNTQ 763
            .:|||.||:|::..:.:|..|:.:|.........|.|::|:.::       ||     |..|.|:
plant   659 AIRISCAGYPTKRTFYEFLNRFGVLAPEVLEGNYDDKVACKMLL-------DKIGLKGYELGKTK 716

  Fly   764 IFFRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKM 828
            :|.||||:|.|:..||.:.......:|...|.|:..::|..::.....:|.:.||.||....::|
plant   717 VFLRAGQMAELDARRAEVLGNAARRIQRQSRTFIACKEFRALRGAAIVLQSNCRGKLACNLYEEM 781

  Fly   829 REARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGAL 893
            |...|.:.:.|..|..:.|..|||:|||...:||..|||:|||:|...:....|..||..:|..|
plant   782 RRQAAAVKIQKIFRRHIARESYLRIRHSTITVQTALRGMVARNEFRFRKQMKAATIIQARLRSHL 846

  Fly   894 ARRAYQKRRRNIIICQAAIRRFLARRKFKRMKAEAKTISHMENKYMGLENKIISMQQRIDELNRD 958
            ....|::.::..:..|...|..:||::.:.:|..|                            ||
plant   847 THSYYKQLQKAALSTQCGWRSRVARKELRTLKMAA----------------------------RD 883

  Fly   959 NSNLKHKTSEISVLKMKLELKKTLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGH 1023
            ...|:             |.|..||              |.:|.|..:|:.|:.::.:|      
plant   884 TGALR-------------EAKDKLE--------------KRVEELTWRLQLEKRQRTEL------ 915

  Fly  1024 AQEEWISQKQTWRQEN-EELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDK 1087
              ||..:|:...:||. |.:|.|::|    |..|.:.:|                ||.::||::.
plant   916 --EEAKTQEYAKQQEALETMRLQVEE----ANAAVIRER----------------EAARKAIEEA 958

  Fly  1088 EVIENENFMLKEELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSKNYSYN 1152
            ..:..|..:|.|:..::                                               |
plant   959 PPVIKETPVLVEDTEKI-----------------------------------------------N 976

  Fly  1153 DSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIK 1217
            ..||.|..|::.|:.|:|..:.|::.:.:..:|:         |||..|.|....:.|||..|::
plant   977 SLTSEVEALKASLQAERQAAENLRKAFSEAEARN---------SELATELENATRKADQLHESVQ 1032

  Fly  1218 HGVEINELNAQHAALQEEVRRRREECIQLKAVLLQQSQSMRSLEPESLQM-------RGNDVNEL 1275
            .             |:|::.....|...|:...|..|.:.|::...|..|       .||.:|..
plant  1033 R-------------LEEKLSNSESEIQVLRQQALAISPTSRTMATRSKTMLLPRTPENGNYLNGG 1084

  Fly  1276 MEAFHSQKLINRQLESE------LKAITEEHNSKLVEMTQEIERLNNEKDELQKVMFESI---DE 1331
            .:......|..|:.|||      |....:|:...||:...:....|.:|.....|:::.:   ..
plant  1085 TKTTPDMTLAVREPESEEKPQKHLNEKQQENQDLLVKCISQNLGYNGDKPVAACVIYKCLLHWRS 1149

  Fly  1332 FE-------DSNVDTLR------QNDRYLRRELQKAVAQFLLVQEELKLANAKLKAYRQDGGQLE 1383
            ||       |..:.|:.      .|:..|...|..:....||:|..||...|             
plant  1150 FEVERTSVFDRIIQTIATAIEVPDNNEVLAYWLSNSATLLLLLQRTLKATGA------------- 1201

  Fly  1384 HKIEEEMIRNKSNGTSADVGANVTKQKSQNPQ--GLMKFHSSDLDKILQRLLSALTPRTVVGLLP 1446
                ..:...:...|||.:...:::....:||  ||...:...|.|:                  
plant  1202 ----ASLTPQRRRTTSASLFGRMSQGLRGSPQSAGLSFLNRQGLTKL------------------ 1244

  Fly  1447 GFPAYLIFMCIRYTDLTNADDDVRELLSKFVIQIKKMHRTPHPIENRVIWLVNSITLLNLMKQYG 1511
                                ||:|::.:|:...:.|...|..                 |.|.||
plant  1245 --------------------DDLRQVEAKYPALLFKQQLTAF-----------------LEKIYG 1272

  Fly  1512 DVDEYVKFNTEKQNQQQLKNFNLFEYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDEIQR 1576
                .::.|.:|:                            |..:.||.             ||.
plant  1273 ----MIRDNLKKE----------------------------ISPLLGLC-------------IQA 1292

  Fly  1577 GRQAHGM----RSRATSIGASSSPEHGGGPAWKQLIGQLEHFYKQFQHFGLDNCYAEQIFHQLLY 1637
            .|.:...    |::|.::...:...|     |:.:...|..:....:..........::|.|:..
plant  1293 PRTSRASLVKGRAQANAVAQQALIAH-----WQSIRKSLNSYLNLMKANNAPPFLVRKVFTQIFS 1352

  Fly  1638 FICAVALNCLMLRGDICMWETGMIIRYNIGCIEDWV--RSKKMSNDVLTALAPLNQ-VSQLLQSR 1699
            ||.....|.|:||.:.|.:..|..::..:..:|.|.  .:.:.:......|..:.| |..|:..:
plant  1353 FINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCIEATDEYAGSAWDELRHIRQAVGFLVIHQ 1417

  Fly  1700 KSEQDVQTIC-DLCTSLSTAQVLKVMKSYKLDDY-----ESEITNVFLEKLTEKLNARQMQKSNS 1758
            |.::.:..|. :||..||..|:.::...|..|.|     .|::.......:||..|     .:.|
plant  1418 KPKKTLDEITRELCPVLSIQQLYRISTMYWDDKYGTHSVSSDVIANMRVMMTEDSN-----NAVS 1477

  Fly  1759 DEFTIDQKFIQPFKVVFRYSDIK-------LEDIELP 1788
            ..|.:|.....||.|    .||.       :.|||.|
plant  1478 SSFLLDDDSSIPFTV----EDISKSMQQVDVNDIEPP 1510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 286/704 (41%)
IQ 900..922 CDD:197470 4/21 (19%)
SMC_prok_B <942..1365 CDD:274008 85/452 (19%)
Myo5_CBD 1424..1792 CDD:271254 67/385 (17%)
XIKNP_001318612.1 Myosin_N 9..52 CDD:460670 9/53 (17%)
MYSc_Myo11 76..720 CDD:276835 286/704 (41%)
Smc <827..>1055 CDD:440809 68/379 (18%)
MyosinXI_CBD 1110..1493 CDD:271259 87/513 (17%)

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