DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and XIG

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_179619.2 Gene:XIG / 816548 AraportID:AT2G20290 Length:1493 Species:Arabidopsis thaliana


Alignment Length:1784 Identity:498/1784 - (27%)
Similarity:789/1784 - (44%) Gaps:434/1784 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAKIWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRNPAILVGQNDL 75
            |:.:||...:..|....:.|.  .|......|| |||    .:.|.||:..|........|.:|:
plant    20 GSIVWVQDPEEAWIDGEVVEV--NGEDIKVQCT-SGK----TVVAKGSNTYPKDMEVPPSGVDDM 77

  Fly    76 TTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMP-LYGPSIIRAYRGHAMGDLEPH 139
            |||:||||||||.||:.|:...: ||||.|.||:|:||:.::| ||...::..|:|.|:|:|.||
plant    78 TTLAYLHEPGVLQNLKSRYYIDE-IYTYTGNILIAVNPFKQLPNLYNDHMMAQYKGAALGELSPH 141

  Fly   140 IFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGG---SESETQVERKVLASS 201
            .||:|:.||.::..|..:.||:||||||||||.:||..|:|.|.:||   |:..| ||.:||.|:
plant   142 PFAVADAAYRQMINEGISQSILVSGESGAGKTETAKMLMKYLAKMGGRAVSDRRT-VEDQVLESN 205

  Fly   202 PIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYHIF 266
            |::||||||||.:|:||||||||.::.| :|.|  .:.||.:.|||||:|||...:..|||||.|
plant   206 PVLEAFGNAKTVKNNNSSRFGKFVEIQF-DQRG--RISGAAIRTYLLERSRVCQVSDPERNYHCF 267

  Fly   267 YQLCAARSKYPE----LVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQIADI 327
            |.||||.   ||    |.|:...:|::||.....:::.|.|::::.:|.:||.::|.::::...|
plant   268 YMLCAAP---PEDKRKLKLNDPTEFRYLNQSHCIKLDGVDDSKEYTKTREAMGIVGINLEEQEAI 329

  Fly   328 VKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLL----RVSADDLRRWLLMR 388
            .:::|.|||||||:    |..|.|.:.|...|  .:..:|:|.|:|.    :...|.|.:.:::.
plant   330 FRVVAAILHLGNIE----FAIGEEPDSSVPTD--ESKKYLKIAAELFMCDEQALEDSLCKRIMVT 388

  Fly   389 KIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDIYGFET 453
            ..|:::. .|.|||   |..:||||||.:|::||.:||..:|.|:.........||||||||||:
plant   389 PEETISR-CLDPNS---AALSRDALAKFVYSRLFDWIVNKINNSIGQDPDSKDMIGVLDIYGFES 449

  Fly   454 FEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIE-SRLGVLD 517
            |:.|||||||||..||||||.|.|||.|:|||||.||.|.|:.|.|.||:..::||| .|.|::.
plant   450 FKTNSFEQFCINLTNEKLQQHFTQHVLKMEQEEYTKEEIEWSQITFPDNRYVLELIEKKRGGIIA 514

  Fly   518 LLDEECRMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFLEKNRDTVS 582
            ||||.|..|:.:.::::.||........:|.||:...|.|.|.|::..|.|....|||||:|.|.
plant   515 LLDEACMFPRSTHKTFSQKLYETLKDNKYFSKPKLSRTDFTICHYAGDVTYQTEQFLEKNKDYVV 579

  Fly   583 KELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVVPSKQHR 647
            .|...:|..|..:....:     ...|..|:.|.|..                            
plant   580 AEHQALLGASRCTFIAGL-----FPPLVEDANKQSKF---------------------------- 611

  Fly   648 KTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAAGF 712
            .::.|||::.|||||..|:.|.|||:||:|||:......:|....:||||..||:||:|:..||:
plant   612 SSIASQFKQQLASLIEGLNTTEPHYIRCVKPNNLLKPSIFENQNSLQQLRCGGVMETIRVCRAGY 676

  Fly   713 PSRWLYPDFYMRYQLLVYRSKLDK-NDMKLSCRNIVMKWIQDE----DKYRFGNTQIFFRAGQVA 772
            |:|..:.:|..|:.:| ..:.||| :|.|.:|:.::      |    :.::.|.|::|.:|||:|
plant   677 PTRKHFDEFLDRFGIL-DSATLDKSSDEKAACKKLL------ETVGLNGFQIGKTKVFLKAGQMA 734

  Fly   773 FLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLIL 837
            .|:..|..:..:...|:|...|.::.|:.|:.::.....||...||.:||.|.:.:|...|.|.:
plant   735 ELDDRRTEVLGRAACIIQWKFRSYLTRQSFIMLRNAAINIQAVYRGQVARYRFENLRREAAALKI 799

  Fly   838 SKYARGWLCRRR-YLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQ-IQRFVRGALARRAYQK 900
            .:..|..|.|:| |:   .::..:|:..|||.||   ..:|...:|.. ||...|...|...|:|
plant   800 QRALRIHLDRKRSYI---EAVVTVQSGLRGMAAR---VVLRRKTKATTVIQSHCRRLRAELHYKK 858

  Fly   901 RRRNIIICQAAIRRFLARRKFKRMKAEAK-TISHMENKYMGLENKIISMQQRIDELNRDNSNLKH 964
            .::..|..|:|.|..|||::.:::|.:|: |:.....|.|        :.::::||.        
plant   859 LKKAAITTQSAWRARLARKELRKLKTDARDTVVLQAAKSM--------LAEKVEELT-------- 907

  Fly   965 KTSEISVLKMKLELKKTLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHAQEEWI 1029
                     .:|:|:|.:..:.:..||                                      
plant   908 ---------WRLDLEKRMRVDMEVSKA-------------------------------------- 925

  Fly  1030 SQKQTWRQENEELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENEN 1094
                   |||.:|:..::||....:..:|:       :|.|::..:...|....:|:..|::   
plant   926 -------QENAKLQLALEEIQLQFEETKVS-------LLKEVEAAKKTAAIVPVVKEVPVVD--- 973

  Fly  1095 FMLKEELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSKNYSYNDSTSLVV 1159
                                                                        |.|:.
plant   974 ------------------------------------------------------------TVLME 978

  Fly  1160 KLRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIKHGVEINE 1224
            ||.|                                     |||||:|    |.||::  ::|:|
plant   979 KLTS-------------------------------------ENEKLKS----LVTSLE--LKIDE 1000

  Fly  1225 LNAQHAALQEEVRRRREECIQLKAVLLQQSQSMRSLEPESLQMRGNDVNELMEAFHSQKLINRQL 1289
            ...:.    ||.::..||  :||          ::|:.|      |.::.|..|.|:       |
plant  1001 TEKKF----EETKKISEE--RLK----------KALDAE------NKIDNLKTAMHN-------L 1036

  Fly  1290 ESELKAITEEHNSKLVEMTQEIERLNNEKDELQKVMFESIDEFEDSNVDTLRQNDRYLRRELQKA 1354
            |.:||.:..|:|                      .:.||:     ........:.|:|...| |.
plant  1037 EEKLKEVKLENN----------------------FLKESV-----LTTPVKTASGRFLSTPL-KN 1073

  Fly  1355 VAQFLLVQEELKLANAKLKAYRQDGGQLEHKIEEEMIRNKSNGTSADVGANVTKQKSQNPQGLMK 1419
            :...|...||.:|:.|:...        ..:|:|.....||.|:..|            ||    
plant  1074 LQNGLFTSEESQLSGAEFTT--------PPRIQESGSDTKSRGSHID------------PQ---- 1114

  Fly  1420 FHSSDLDKILQRLLSALTPRTVVGLLPGFP--AYLIFMCIRY-----TDLTNADDDVRELLSKFV 1477
              ..|:|    .|::::|..  ||...|.|  |:.|:.|:.:     .:.||..|.:.:::...:
plant  1115 --HEDVD----ALINSVTKN--VGFSQGKPVAAFTIYKCLLHWKSFEAERTNVFDRLVQMIGSAI 1171

  Fly  1478 IQIKKMHRTPHPIENRVIWLVNSITLLNLMKQ---YGDVDEYVKFNTEKQNQQQLKNFNLFEYRR 1539
                   :......|...||.|:.|||.:::|   .|....     |..:....|..:....:|.
plant  1172 -------KDEDNDANLAYWLSNTSTLLFMLQQSLKSGGTGA-----TPLRQSPSLVRWMTKGFRS 1224

  Fly  1540 VILDLI---------VNLYQALIMQIQGLLDPKIVPAILNNDEIQRGRQAHGMRSRATSIGA--S 1593
            ...:.|         ::..|.|...::     ||:..|.:|           ::....::.|  .
plant  1225 PAAEAIRPVDAKDPALHFKQQLEAYVE-----KILGIIWDN-----------LKKELNTVLALCI 1273

  Fly  1594 SSPEHGGGPA---------WKQLIGQLEHFYKQFQHFGLDNCYAEQIFHQLLYFICAVALNCLML 1649
            .:|:...|.|         |:.:|..|:......:...:.....::||.|....|.....|.|:.
plant  1274 QAPKTFKGNALISITTANYWQDIIEGLDALLSTLKESFVPPVLIQKIFSQAFSLINVQVCNSLVT 1338

  Fly  1650 RGDICMWETGMIIRYNIGCIEDWVRSKK-----MSNDVL--TALAPLNQVSQLLQSRKSEQDVQT 1707
            |.|.|.:..|..::..:..:|.|....|     .|.|.|  |..|    |..||..:|.......
plant  1339 RPDNCSFINGEYLKSGLEKLEKWCCETKEEYAGSSWDELKHTRQA----VGFLLIHKKYNISYDE 1399

  Fly  1708 IC-DLCTSLSTAQVLKVMKSYKLDDYESE 1735
            |. |||.:|...|..|:...||.:.|.::
plant  1400 IANDLCPNLQIQQHFKLCTLYKDEIYNTK 1428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 278/700 (40%)
IQ 900..922 CDD:197470 8/21 (38%)
SMC_prok_B <942..1365 CDD:274008 61/422 (14%)
Myo5_CBD 1424..1792 CDD:271254 72/350 (21%)
XIGNP_179619.2 COG5022 12..1421 CDD:227355 495/1775 (28%)
MYSc_Myo11 86..729 CDD:276835 278/700 (40%)

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