DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and Myo1e

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:XP_011241116.1 Gene:Myo1e / 71602 MGIID:106621 Length:1119 Species:Mus musculus


Alignment Length:993 Identity:310/993 - (31%)
Similarity:508/993 - (51%) Gaps:193/993 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGD 135
            |.:|:..||.:.|..::.||:.|:.: ..|:||.|.:|:::||:.:||.:|...:..|:|.|..:
Mouse    32 GVDDMVLLSKITESSIVENLKKRYMD-DYIFTYIGSVLISVNPFKQMPYFGEKEVEMYQGAAQYE 95

  Fly   136 LEPHIFALAEEAYTK--LEREN-CNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQ-VERK 196
            ..|||:|||:..|..  ::||| |   :|:||||||||||:|||.|.|.:.|.|...:.| |:..
Mouse    96 NPPHIYALADSMYRNMIIDRENQC---VIISGESGAGKTVAAKYIMSYVSRVSGGGPKVQHVKDI 157

  Fly   197 VLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGER 261
            :|.|:|::||||||||.||:|||||||:.::.| :..|..  .|..:..:||||||||.:..|||
Mouse   158 ILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQF-SPGGEP--DGGKISNFLLEKSRVVMRNPGER 219

  Fly   262 NYHIFYQLCAARSKYPE----LVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQ 322
            ::||||||....|  ||    |.:...|.:.:|::.|:.:::.:.|...|.||:.||.|:|...:
Mouse   220 SFHIFYQLIEGAS--PEQKQSLGITSMDYYYYLSLSGSYKVDDIDDKRDFQETLHAMNVIGIFSE 282

  Fly   323 QIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLM 387
            :...:::|:|||||||||...:..|..:.|.:.          .|...|.||.::.|.|:..|..
Mouse   283 EQTLVLQIVAGILHLGNISFKEVGNYAAVESEE----------FLAFPAYLLGINQDRLKEKLTS 337

  Fly   388 RKIES----VNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDI 448
            |:::|    .:|.:.:..::|.|...||||||.::|::|.::|..:||::....::.: ||||||
Mouse   338 RQMDSKWGGKSESIHVTLNVEQACYTRDALAKALHARVFDFLVDSINKAMEKDHEEYN-IGVLDI 401

  Fly   449 YGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRL 513
            ||||.|:.|.|||||||:.||||||.|.:...|.|||||::|||.||.|::::|:...|||||::
Mouse   402 YGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIEYFNNKIVCDLIESKV 466

  Fly   514 ---GVLDLLDEEC----RMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVN 571
               |::.:||:.|    .:.:|:|::...||..:.....||.....|   |.|.|::..|.||::
Mouse   467 NPPGIMSILDDVCATMHAVGEGADQTLLQKLQMQIGSHEHFNSWNQG---FIIHHYAGKVSYDMD 528

  Fly   572 GFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVD-SAKSSTLGGRVVISAGRKQQGND 635
            ||.|:|||.:..:|.:::..|.:...|.:..    :.|..| ..:.:|.|.::      |:|.||
Mouse   529 GFCERNRDVLFMDLIELMQSSELPFIKSLFP----ENLQADKKGRPTTAGSKI------KKQAND 583

  Fly   636 TRRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACG 700
                                     |:|||...||||:||||||:.|....||.:::..|:...|
Mouse   584 -------------------------LVSTLMKCTPHYIRCIKPNETKKPKDWEESRVKHQVEYLG 623

  Fly   701 VLETVRISAAGFPSRWLYPDFYMRYQLL------VYRSKLDKNDMKLSCRNIVMKWIQDEDKYRF 759
            :.|.:|:..||:..|.::..|..||.:|      |:|     .|.|....:::.....|.|:::.
Mouse   624 LKENIRVRRAGYAYRRVFQKFLQRYAILTKATWPVWR-----GDEKQGVLHLLQSVNMDSDQFQL 683

  Fly   760 GNTQIFFRAGQVAF-LEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARE 823
            |.:::|.:|.:..| ||::|......|..::|...|:||.|::::                    
Mouse   684 GRSKVFIKAPESLFLLEEMRERKYDGYARVIQKTWRKFVARKKYV-------------------- 728

  Fly   824 RTQKMREARAGLILSKYARGWLCRRRYLRLRHSISG--IQTYARGMLARNKFHAMRDHYRAVQIQ 886
               :|||..:.|:|:|..          |.|:||:.  |..|. ||..|            .::|
Mouse   729 ---QMREEASDLLLNKKE----------RRRNSINRNFIGDYI-GMEER------------PELQ 767

  Fly   887 RFVRGALARRAYQKRRRNIIICQAAIRRFLARRKFKRMKAE-AKTISHMENKYMGLENKIISMQQ 950
            :||.                               ||.|.: |.|::..:.::.|::..::...:
Mouse   768 QFVG-------------------------------KREKIDFADTVTKYDRRFKGVKRDLLLTPK 801

  Fly   951 RIDELNR-------DNSNLKHKTSEISVLKMKLELKKTLEAEFKNVKAAC-----QDKDKLIEAL 1003
            .:..:.|       |...:|      .|||.::|:::.|......::...     |:.|.|:|::
Mouse   802 CLYLIGREKVKQGPDKGVVK------EVLKRRIEVERILSVSLSTMQDDIFILHEQEYDSLLESV 860

  Fly  1004 NK----QLEAER-DEKMQ 1016
            .|    .|.|:| :||.|
Mouse   861 FKTEFLSLLAKRYEEKTQ 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 251/708 (35%)
IQ 900..922 CDD:197470 0/21 (0%)
SMC_prok_B <942..1365 CDD:274008 19/92 (21%)
Myo5_CBD 1424..1792 CDD:271254
Myo1eXP_011241116.1 MYSc_Myo1 45..691 CDD:276829 251/708 (35%)
Myosin_TH1 731..932 CDD:461801 42/208 (20%)
SH3_MyoIe_If_like 1067..1118 CDD:212761
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.