DRSC/TRiP Functional Genomics Resources

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Protein Alignment didum and MYO1C

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_001074248.1 Gene:MYO1C / 4641 HGNCID:7597 Length:1063 Species:Homo sapiens


Alignment Length:1145 Identity:329/1145 - (28%)
Similarity:512/1145 - (44%) Gaps:252/1145 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VGQNDLTTL-SYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAM 133
            ||..|...| ::..|...:.|||.||.| .:||||.|.:||::|||.::.:|....:..|||.:.
Human    46 VGVQDFVLLENFTSEAAFIENLRRRFRE-NLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSF 109

  Fly   134 GDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAV------GGSESETQ 192
            .::.||:||:|:..|..|..|..:.::::|||||||||.:.|..::::|..      ||:     
Human   110 YEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGA----- 169

  Fly   193 VERKVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMF-LQGATM--H--TYLLEKSR 252
            |..::|.|:|::||||||||.||||||||||:        |.|.| .:||.:  |  :|||||||
Human   170 VRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKY--------MDVQFDFKGAPVGGHILSYLLEKSR 226

  Fly   253 VVYQAQGERNYHIFYQLC--AARSKYPELVLD-HQDKFQFLNMGGAPEIERVSDAEQFNETVQAM 314
            ||:|..||||:||||||.  ........|.|: :...:.:|..|...::..::|...:....:|:
Human   227 VVHQNHGERNFHIFYQLLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSSINDKSDWKVVRKAL 291

  Fly   315 TVLGFSIQQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSAD 379
            ||:.|:..::.|::.|:|.:||||||..:.  ||.|..:.:       .:..|:....||.|...
Human   292 TVIDFTEDEVEDLLSIVASVLHLGNIHFAA--NEESNAQVT-------TENQLKYLTRLLSVEGS 347

  Fly   380 DLRRWLLMRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGS------K 438
            .||..|..|||.:..|.:|.|.::|.|..|||||||.:|::.|.::||.:|:||.:..      :
Human   348 TLREALTHRKIIAKGEELLSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWR 412

  Fly   439 QCSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQ 503
            ..:.:|:|||||||.|:.||||||||||.||||||.|.:...|.|||||..|||.|..:.:::|:
Human   413 STTVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNK 477

  Fly   504 PCIDLIESRL-GVLDLLDEECRMP-KGSDESWAGKLIGKCNKFPHF---------EKPRFGTTSF 557
            ...||:|.:. |::.:|||||..| :.:|.::..||.......|||         .:...|...|
Human   478 IICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADQRTRKSLGRGEF 542

  Fly   558 FIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGR 622
            .:.|::..|.|.|.|||:||.|.:.:.|.:.:..|...:..|          |.|.::.|     
Human   543 RLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSKNPIMSQ----------CFDRSELS----- 592

  Fly   623 VVISAGRKQQGNDTRRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKW 687
                                .|:..:||.:||:.||..|:..|.:..|.|||||||||.|...::
Human   593 --------------------DKKRPETVATQFKMSLLQLVEILQSKEPAYVRCIKPNDAKQPGRF 637

  Fly   688 ETAKIIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKWI- 751
            :...|..|::..|:||.:|:..|||..|..|..|..||:.|              |......|. 
Human   638 DEVLIRHQVKYLGLLENLRVRRAGFAYRRKYEAFLQRYKSL--------------CPETWPTWAG 688

  Fly   752 --QD------------EDKYRFGNTQIFFRAGQVAFLEQVRANLRKKYI-TIVQSVVRRFVYRRQ 801
              ||            .::|:.|.|:||.|..:..|..:....:|::.: |.:|:..|.|.:|::
Human   689 RPQDGVAVLVRHLGYKPEEYKMGRTKIFIRFPKTLFATEDALEVRRQSLATKIQAAWRGFHWRQK 753

  Fly   802 FLRIQKVINGIQKHARGYLARERTQKMREARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARG 866
            |||::                                   |..:|             ||::.||
Human   754 FLRVK-----------------------------------RSAIC-------------IQSWWRG 770

  Fly   867 MLARNKFHAMRDHYRAVQIQRFVRGALARRAYQKRRRNIIICQAAIRRFLARRKFKRMKAEAKTI 931
            .|.|.|  |.:..:.|..|:|.:||.:.|.|                        .|....|..:
Human   771 TLGRRK--AAKRKWAAQTIRRLIRGFVLRHA------------------------PRCPENAFFL 809

  Fly   932 SHMENKYMGLENKIISMQQRIDELNRDNSNLKHKTSEISVLKMKLEL-KKTLEAEFKNVKAACQD 995
            .|:...::                                |.::.:| :..|:..:.....|.::
Human   810 DHVRTSFL--------------------------------LNLRRQLPQNVLDTSWPTPPPALRE 842

  Fly   996 KDKLIEALN------KQLEAERDEKMQLLEENGHAQEEWISQKQTWRQENEEL----RRQIDEII 1050
            ..:|:..|.      |...:...|..|.|::...|.|.:..:|..:.|....|    |...|||.
Human   843 ASELLRELCIKNMVWKYCRSISPEWKQQLQQKAVASEIFKGKKDNYPQSVPRLFISTRLGTDEIS 907

  Fly  1051 DMAKNAEVNQRNQEDRMLAEIDNRELN-EAYQRAIKDKEVIENENFMLKEEL----------SRL 1104
            .....|..::..|....:.:.|.:... .:.|..:....|:..|:..:|:.:          |.|
Human   908 PRVLQALGSEPIQYAVPVVKYDRKGYKPRSRQLLLTPNAVVIVEDAKVKQRIDYANLTGISVSSL 972

  Fly  1105 TAGSFSLHARKASNASSQN----EDDVGYASAKNTLDINR 1140
            :...|.||.::|.|....:    .|.|.....|..|..||
Human   973 SDSLFVLHVQRADNKQKGDVVLQSDHVIETLTKTALSANR 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 254/728 (35%)
IQ 900..922 CDD:197470 0/21 (0%)
SMC_prok_B <942..1365 CDD:274008 39/225 (17%)
Myo5_CBD 1424..1792 CDD:271254
MYO1CNP_001074248.1 MYSc_Myo1 62..718 CDD:276829 254/727 (35%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 608..630 11/21 (52%)
IQCG 751..781 CDD:467744 14/79 (18%)
Myosin_TH1 874..1055 CDD:461801 29/139 (21%)
Blue background indicates that the domain is not in the aligned region.

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