DRSC/TRiP Functional Genomics Resources

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Protein Alignment didum and MYO1F

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_001427538.1 Gene:MYO1F / 4542 HGNCID:7600 Length:1119 Species:Homo sapiens


Alignment Length:967 Identity:306/967 - (31%)
Similarity:483/967 - (49%) Gaps:163/967 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGD 135
            |.:|:..|..:.|..:..|||.||.: ..|:||.|.:|:::||:.:||.:....|..|:|.|..:
Human    18 GVDDMVLLPQITEDAIAANLRKRFMD-DYIFTYIGSVLISVNPFKQMPYFTDREIDLYQGAAQYE 81

  Fly   136 LEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAV-GGSESETQVERKVLA 199
            ..|||:||.:..|..:..:..|..:|:||||||||||:|||.|.|.:.| ||.|....|:..:|.
Human    82 NPPHIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGEKVQHVKDIILQ 146

  Fly   200 SSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYH 264
            |:|::||||||||.||:|||||||:.::.| ::.|..  .|..:..:||||||||.|.:.|||:|
Human   147 SNPLLEAFGNAKTVRNNNSSRFGKYFEIQF-SRGGEP--DGGKISNFLLEKSRVVMQNENERNFH 208

  Fly   265 IFYQLC--AARSKYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGF--SIQQIA 325
            |:|||.  |::.:...|.|...|.:.:||.....:::...|...|.||:.||.|:|.  ||||: 
Human   209 IYYQLLEGASQEQRQNLGLMTPDYYYYLNQSDTYQVDGTDDRSDFGETLSAMQVIGIPPSIQQL- 272

  Fly   326 DIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMRKI 390
             :::::|||||||||    .|.|.......:|.|:      |...|.||.:.:..|:..|..||:
Human   273 -VLQLVAGILHLGNI----SFCEDGNYARVESVDL------LAFPAYLLGIDSGRLQEKLTSRKM 326

  Fly   391 ES----VNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDIYGF 451
            :|    .:|.:.:..::|.|...||||||.:||:||.::|..:|:::....::.| |||||||||
Human   327 DSRWGGRSESINVTLNVEQAAYTRDALAKGLYARLFDFLVEAINRAMQKPQEEYS-IGVLDIYGF 390

  Fly   452 ETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRL--- 513
            |.|:.|.|||||||:.||||||.|.:...|.|||||::|||.||.|.:::|:...||||::|   
Human   391 EIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVQEGIRWTPIQYFNNKVVCDLIENKLSPP 455

  Fly   514 GVLDLLDEECRMPK----GSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFL 574
            |::.:||:.|....    |:|::...||........||..   .:..|.|.|::..|.|||:||.
Human   456 GIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTHEHFNS---WSAGFVIHHYAGKVSYDVSGFC 517

  Fly   575 EKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRR 639
            |:|||.:..:|.:::..|..:..:.:.. |::|.  ....:.||.|.::      |:|.||    
Human   518 ERNRDVLFSDLIELMQTSEQAFLRMLFP-EKLDG--DKKGRPSTAGSKI------KKQAND---- 569

  Fly   640 VVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWE------------TAKI 692
                                 |::||...||||:||||||:.|....||            :|..
Human   570 ---------------------LVATLMRCTPHYIRCIKPNETKRPRDWEENRTGDSPPRGDSAYP 613

  Fly   693 IQQLRACGVLETVRISAAGFPSRWLYP---------DFYMRYQLLVYRS-KLDKNDMKLSCRNIV 747
            ..|.:|.|.:........|..||...|         ...:||.:|...: ...:.|.:...::::
Human   614 PHQSQAPGGIPGPEGEHQGAQSRLRLPPPVRQIPAEPSALRYAILTPETWPRWRGDERQGVQHLL 678

  Fly   748 MKWIQDEDKYRFGNTQIFFRAGQVAF-LEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVING 811
            .....:.|:|:.|:|::|.:..:..| ||:||.              |:|   ..|.|.      
Human   679 RAVNMEPDQYQMGSTKVFVKNPESLFLLEEVRE--------------RKF---DGFART------ 720

  Fly   812 IQKHARGYLARERTQKMREARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAM 876
            |||..|.::|..:.::|||..:.::|:|..          |.|:||:           ||    .
Human   721 IQKAWRRHVAVRKYEEMREEASNILLNKKE----------RRRNSIN-----------RN----F 760

  Fly   877 RDHYRAVQIQRFVRGALARR----------AYQKR----RRNIIICQAAIRRFLARRKFKRMKAE 927
            ...|..::.:..:|..|.:|          .|.:|    :|::|:....: ..:.|.|.|:...:
Human   761 VGDYLGLEERPELRQFLGKRERVDFADSVTKYDRRFKPIKRDLILTPKCV-YVIGREKVKKGPEK 824

  Fly   928 AKTISHMENKYMGLENKIISMQQRIDE---LNRD--NSNLK--HKTSEISVLKMKLE 977
            .:....::.|......:.:|:..|.|:   |..|  :|.|:  .||..:|:|..:.|
Human   825 GQVCEVLKKKVDIQALRGVSLSTRQDDFFILQEDAADSFLESVFKTEFVSLLCKRFE 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 253/720 (35%)
IQ 900..922 CDD:197470 5/25 (20%)
SMC_prok_B <942..1365 CDD:274008 12/43 (28%)
Myo5_CBD 1424..1792 CDD:271254
MYO1FNP_001427538.1 None
Blue background indicates that the domain is not in the aligned region.

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