DRSC/TRiP Functional Genomics Resources

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Protein Alignment didum and Myo3b

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_796350.2 Gene:Myo3b / 329421 MGIID:2448580 Length:1333 Species:Mus musculus


Alignment Length:912 Identity:298/912 - (32%)
Similarity:461/912 - (50%) Gaps:168/912 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 QNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGDL 136
            ::||..|..|.|..:::.|:.|:.: .:||||.|.||:|:||:..:.:|.|...|.|.|......
Mouse   361 EDDLVNLEVLDEDTIIYWLQKRYAD-ALIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRSSN 424

  Fly   137 EPHIFALAEEAYTKL---ERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVERKVL 198
            .|||||.|:.||..|   .::.|   |::|||||:|||.||...:::...:|.::::| :.:|:|
Mouse   425 PPHIFASADNAYQCLVTFSKDQC---IVISGESGSGKTESAHLIVQHLTFLGKADNQT-LRQKIL 485

  Fly   199 ASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNY 263
            ..:.::||||||:|..|||||||||:.:::|.....||   ||.:..||||||||:.||.||:|:
Mouse   486 QVNSLVEAFGNARTAINDNSSRFGKYLEMMFTPTGAVM---GARISEYLLEKSRVIQQAAGEKNF 547

  Fly   264 HIFYQLCAA---RSKYPELVLDHQDKFQFLNMGGAPEIERV--------SDAEQFNETVQAMTVL 317
            ||||.:.|.   :.|..|..|..:...:::    |.|.|||        |...||........::
Mouse   548 HIFYYIYAGLYHQKKLAEFRLPEEKPPRYI----AGETERVMQDITSKESYRTQFEAIQHCFKII 608

  Fly   318 GFSIQQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLR 382
            ||:.:::..:.:||||||::|:|:    |...|.:..:|..:: .|...|:..|.:|.:|:::|:
Mouse   609 GFADKEVHSVYRILAGILNIGSIE----FAAISSQHQTDKSEV-PNPEALENAACVLCISSEELQ 668

  Fly   383 RWLLMRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSF----- 442
            ..|....:.:..|.::..|:::.|:..|||::|.:|.:||.:||..:|..|......||.     
Mouse   669 EALTSHCVVTRGETIVRANTVDRAEDVRDAMSKALYGRLFSWIVNRINTLLQPDKNICSAEDRMN 733

  Fly   443 IGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCID 507
            :|:|||:|||.|:.|||||.|||.|||::|..||||||.|||.||..||:...::.:.||:|.:|
Mouse   734 VGILDIFGFEDFQRNSFEQLCINIANEQIQYYFNQHVFALEQMEYKNEGVDAVLVQYEDNRPLLD 798

  Fly   508 L-IESRLGVLDLLDEECRMPKGSDESWAGKLIG--KCNKFPHFEKPRFGTTSFFIKHFSDTVEYD 569
            : ::..||:|.|||||.|.|:|:|::...|...  :| ||  |.:|:.....|.|:|::..|.||
Mouse   799 MFLQKPLGLLALLDEESRFPQGTDQTLVDKFEDNLRC-KF--FWRPKGVELCFGIQHYAGPVLYD 860

  Fly   570 VNGFLEKNRDTVSKELTQVLSESNMSLAKQVMT--LEEIDTLCVDSAKSSTLGGRVV---ISAGR 629
            .:|.|||||||:..::..||..|...|.:|:.:  |.:...|....|| .|...|.:   .||||
Mouse   861 ASGVLEKNRDTLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRAK-ITASSRSLPPHFSAGR 924

  Fly   630 KQQGNDT----RRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETA 690
            .:.  ||    |.....:...|:|:.|.|:.||..|:|.:....||::||||||||:.|.::...
Mouse   925 AKV--DTLEVIRHPEETTNMKRQTMASYFRYSLMDLLSKMVVGQPHFIRCIKPNDDRKALQFSQD 987

  Fly   691 KIIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMK-----W 750
            :::.|||:.|:||||.|...|:..|..:.:|..||..|.:|:.......|.||..|:.|     |
Mouse   988 RVLAQLRSTGILETVSIRRQGYSHRIFFEEFVKRYYYLAFRAHQTPPANKESCVAILEKSRLDHW 1052

  Fly   751 IQDEDKYRFGNTQIFFRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKH 815
            :       .|.|::|.:...|   ||:...||:        |:.|.|                  
Mouse  1053 V-------LGKTKVFLKYYHV---EQLNLLLRE--------VMGRVV------------------ 1081

  Fly   816 ARGYLARERTQKMREARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHY 880
                                :|..|.:|||..|||                              
Mouse  1082 --------------------MLQAYTKGWLGARRY------------------------------ 1096

  Fly   881 RAVQIQRFVRGALARRAYQKRRRNIIICQAAIRRFLARRKFK---RMKAEAKTISHM------EN 936
                          :||.:||.:..|..|:|.|.:.||||.|   |.::|::...|.      :.
Mouse  1097 --------------KRAKEKREKGAITIQSAWRGYDARRKLKQRSRRRSESEAHIHTVLQTTPDQ 1147

  Fly   937 KY 938
            ||
Mouse  1148 KY 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 259/718 (36%)
IQ 900..922 CDD:197470 10/21 (48%)
SMC_prok_B <942..1365 CDD:274008
Myo5_CBD 1424..1792 CDD:271254
Myo3bNP_796350.2 STKc_myosinIIIB_N 20..310 CDD:270808
MYSc_Myo3 373..1062 CDD:276830 259/718 (36%)
Blue background indicates that the domain is not in the aligned region.

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