DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and MYO1H

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:XP_011536525.1 Gene:MYO1H / 283446 HGNCID:13879 Length:1044 Species:Homo sapiens


Alignment Length:993 Identity:324/993 - (32%)
Similarity:481/993 - (48%) Gaps:183/993 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VGQNDLTTL-SYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAM 133
            ||..|...| :|..|...:.|||.||.| .:||||.|.:||::|||.|:.:|..|.:..|:|...
Human    11 VGVQDFVLLDAYTSESAFVDNLRKRFSE-NLIYTYIGTLLVSVNPYQELGIYTVSQMELYQGVNF 74

  Fly   134 GDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVER-KV 197
            .:|.||::|:|:.||..:..|..|..|::|||||||||.::|..:.|||.........|:.| ::
Human    75 FELPPHVYAIADNAYRMMCAELNNHFILISGESGAGKTEASKKILEYFAVTCPMTQSLQIARDRL 139

  Fly   198 LASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERN 262
            |.|:|::||||||:|.||||||||||:..:.|..| |:..  |..:.:||:||||||||.:||||
Human   140 LFSNPVLEAFGNARTLRNDNSSRFGKYMDIQFDFQ-GIPV--GGHIISYLIEKSRVVYQNEGERN 201

  Fly   263 YHIFYQLCAA----RSKYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQ 323
            :||||||.|.    |..|..|..|.| .:::|:.|...:...:||...:.....|.:|:.|:...
Human   202 FHIFYQLLAGGEEERLSYLGLERDPQ-LYKYLSQGHCAKESSISDKNDWKTVSNAFSVIDFTEAD 265

  Fly   324 IADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMR 388
            :.::..|:|.:||||||         ..|||...|....:...::..|.||.|....|...|..|
Human   266 LENLFGIIASVLHLGNI---------GFEEDDQGCATIPDTHEIKWIAKLLGVHPSVLLEALTHR 321

  Fly   389 KIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSL-NNGSKQCSFIGVLDIYGFE 452
            |||:..|.|:.|.::|.:..||||:||.:|.:.|.::|..:|.|| |....:.:.||:|||||||
Human   322 KIEAKTEEVICPLTLELSVYARDAMAKAVYGRTFTWLVNKINSSLVNKDFTRKTVIGLLDIYGFE 386

  Fly   453 TFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESR-LGVL 516
            .|:.|.||||||||.||||||...:...|.||.||..|||.|..|.:::|:...||:|.| .|::
Human   387 VFDKNGFEQFCINYCNEKLQQLLIERTLKAEQAEYEMEGIEWEPIKYFNNKIICDLVEERHKGII 451

  Fly   517 DLLDEECRMP-KGSDESWAGKLIGKCNKFPHFE---------KPRFGTTSFFIKHFSDTVEYDVN 571
            .:|||||..| ..:|.|:..||..|..|..|||         :.|.|...|.:.|::..|.|...
Human   452 SILDEECIRPGPATDLSFLEKLEEKVGKHAHFETRKLAGPKGRKRIGWMEFRLLHYAGEVTYCTK 516

  Fly   572 GFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDT 636
            ||||||.|.:.:.|.:||.:|...:.::...|.|:                            :.
Human   517 GFLEKNNDLLYRHLKEVLCKSKNIILRECFLLAEL----------------------------EN 553

  Fly   637 RRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGV 701
            |||       ..|||:||:.||:||:.||.:..|.|:|||||||.|...|::...|..|::..|:
Human   554 RRR-------PPTVGTQFKNSLSSLLETLISKEPSYIRCIKPNDRKEPSKFDDFLIRHQIKYLGL 611

  Fly   702 LETVRISAAGFPSRWLYPDFYMRY----------QLLVYRSKLDKNDMKLSCRNI---------- 746
            :|.:|:..|||..|..|..|..||          :|::  |...|:..|..|.:.          
Human   612 MEHLRVRRAGFAYRRKYEHFLQRYLGVELSHWVERLMM--SLFYKDRYKSLCPDTWPHWHGPPAE 674

  Fly   747 ----VMKWI-QDEDKYRFGNTQIFFRAGQVAFLEQVRANLRK-KYITIVQSVVRRFVYRRQFLRI 805
                ::|:| ...::|:.|.|:||.|..:..|..:......| :.:..:|:..:|.:.||::::.
Human   675 GVERLIKYIGYKPEEYKLGKTKIFIRFPRTLFATEDAFEFSKHQLVARIQATYKRCLGRREYVKK 739

  Fly   806 QKVINGIQKHARGYLARERTQKMREARAGLILSKYARGW------LC----------RRRY-LRL 853
            ::....::.|.||.|||:..|  |...|..|:.|:.:|:      ||          |:.| |.|
Human   740 RQAAIKLEAHWRGALARKAIQ--RRKWAVRIIRKFIKGFISRNKPLCPDNEEFIVFVRKNYILNL 802

  Fly   854 RHSI-----------------------------SGIQTYARGMLARNK------------FHAMR 877
            |:.:                             :.:|.|.||:.|..|            |...:
Human   803 RYHLPKTVLDKSWLRPPGILENASDLLRKMCVRNLVQKYCRGITAERKAMMQQKVVTSEIFRGRK 867

  Fly   878 DHYRAVQIQRFVRGAL---------------------------ARRAYQKRRRNIIICQ-AAIRR 914
            |.|.....|.||...:                           .|:.::.|:|.:|:.| ||...
Human   868 DGYTESLNQPFVNSRIDEGDINPKVLQLISHEKIQYGVPVIKYDRKGFKARQRQLILTQKAAYVV 932

  Fly   915 FLARRKFKRMKAEAKTIS 932
            .||:.|.|...:..|.:|
Human   933 ELAKIKQKIEYSALKGVS 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580 275/750 (37%)
MYSc_Myo5 84..767 CDD:276831 267/724 (37%)
IQ 900..922 CDD:197470 9/22 (41%)
GBP_C <971..1086 CDD:303769
coiled coil 1049..1068 CDD:293879
coiled coil 1077..1086 CDD:293879
JAKMIP_CC3 <1190..1299 CDD:292653
Myo5_CBD 1424..1792 CDD:271254
MYO1HXP_011536525.1 MYSc 8..711 CDD:214580 275/750 (37%)
MYSc_Myo1 26..700 CDD:276829 267/724 (37%)
Myosin_TH1 856..1019 CDD:283635 19/95 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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