DRSC/TRiP Functional Genomics Resources

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Protein Alignment didum and myo51

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_596233.1 Gene:myo51 / 2540560 PomBaseID:SPBC2D10.14C Length:1471 Species:Schizosaccharomyces pombe


Alignment Length:1794 Identity:507/1794 - (28%)
Similarity:809/1794 - (45%) Gaps:432/1794 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAKIWVPHADLVWESATLEESYRKGAG--FLKICTDSGKLKEVKLKADGSDLPPLRNPAILVGQ- 72
            |::.||.:.:..|::|.|.|....|.|  ...:...||.|:.|..:       .|:|..|  || 
pombe     9 GSECWVSNNNGHWDAARLIEIKDNGGGKVVATVAKSSGVLETVNYQ-------QLQNRNI--GQS 64

  Fly    73 ---NDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMP-LYGPSIIRAYRGHAM 133
               :|||.|.||:||.|||.|..|:..:| ||||.||:||:||||..:| .|..::|:.:.....
pombe    65 ESPSDLTNLPYLNEPSVLHALHNRYNNKQ-IYTYSGIVLVSINPYQNLPEFYNDNLIKHFHKDPE 128

  Fly   134 GDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSES----ETQVE 194
            ....||::::|...|..|..::.|.:|||||||||||||:|||.|||..:|.|.:.    :..||
pombe   129 AAKVPHLYSIASSCYHALTTDSKNQTIIVSGESGAGKTVAAKYIMRYLTSVQGVDHNGVVKRSVE 193

  Fly   195 RKVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQG 259
            .:|||::|||||||||||.||||||||||:..:.|...   :.:.||.::|||||:||||...:|
pombe   194 NQVLATNPIMEAFGNAKTIRNDNSSRFGKYVTISFDEN---LLITGANVNTYLLERSRVVSLLKG 255

  Fly   260 ERNYHIFYQLCAA-----RSKYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGF 319
            ||||||||||...     |.|:   .|:....|.:|:.|...||..|.|:..|..|.:|::.:|.
pombe   256 ERNYHIFYQLITGCTEEQRDKW---FLESASSFNYLSQGNCDEISGVDDSNDFTITCRALSTIGI 317

  Fly   320 SIQQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRW 384
            |..:..|:..:||.:||||||:|....||         ..|...|.:||..|.||.|.:..|.:|
pombe   318 SESRQEDVFCLLAALLHLGNIEVCATRNE---------AQIQPGDGYLQKAALLLGVDSSTLAKW 373

  Fly   385 LLMRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSL-NNGSKQCS--FIGVL 446
            ::.|::::.:|.::..:::|.|.:.||::||::|:.||.:||.::|.|| :|..|:.:  :|||:
pombe   374 IVKRQLKTRSETIITSSTLEHAISIRDSVAKYLYSALFLWIVHMINASLDHNKVKRAAYKYIGVV 438

  Fly   447 DIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIES 511
            ||||||.||.||.||||||||||||||:||:||||||||||:|||:.|.:|::.|||.||.|||.
pombe   439 DIYGFEHFEKNSMEQFCINYANEKLQQEFNKHVFKLEQEEYVKEGLDWRLIEYSDNQGCISLIED 503

  Fly   512 RLGVLDLLDEECRMPKGSDESWAGKLIGKCNKFP-----HFEKPRFGTTSFFIKHFSDTVEYDVN 571
            :||:|.|||||||:|.|:.:|:..||   .|:.|     .::|.||...||.:||::..|.|.|:
pombe   504 KLGILSLLDEECRLPSGNHQSFLQKL---NNQLPTKHSQFYKKSRFNDGSFMVKHYALDVSYQVH 565

  Fly   572 GFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDT 636
            .||.||.|.:..|...:|..|.          .|..|..:|....       ::|:    |..:.
pombe   566 DFLAKNSDAIPDEFISLLQNSK----------NEFITYLLDFYMQ-------LVSS----QNKNP 609

  Fly   637 RRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGV 701
            |:..:..|   .|:.|.|:.||:.|::|:.:|..||:||||||::|:.:.:....::.|||||||
pombe   610 RKTAISRK---PTLSSMFKSSLSQLMTTVSSTNVHYIRCIKPNEEKLPWTFSPPMVLSQLRACGV 671

  Fly   702 LETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKWI-QDEDKYRFGNTQIF 765
            .||:|||:.|||:|:.|.:|..|:::|:...:.::::.||:. |||...| .|...::.|.::||
pombe   672 FETIRISSLGFPARFSYEEFAHRFRILLSSKEWEEDNKKLTL-NIVNSVIPHDNLNFQVGRSKIF 735

  Fly   766 FRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMRE 830
            ||:..:...|:.......|...::||.:|.|..|:::.|..|.|..:|....|:|.|:|.::.:.
pombe   736 FRSNVIGNFEEAHRATCSKSTVLLQSAIRGFFTRKEYQRTVKFIIKLQSVIMGWLTRQRFEREKI 800

  Fly   831 ARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARGMLARNKF-HAMRDHYRAVQIQRFVRGALA 894
            .||.:::..:.|.::.|:|||.|......||:..|..:|.::: :.:|:. .|..:.:|.|...|
pombe   801 ERAAILIQAHWRSYIQRKRYLSLIKCAIVIQSIVRKNIAYSRYINELRES-SATLLAKFWRAYNA 864

  Fly   895 RRAYQKRRRNIIICQAAIRRFLARRKFKRMKAEAKTISHMENKYMGLENKIISMQQRIDELNRDN 959
            |:.::..::::|..|...|..|.||..:|::..|...|.:..|...|:..|..:.::        
pombe   865 RKTFRGLKKSVIALQCVSRSVLTRRYLRRLQDSAGRTSILYEKQKNLQASITEVSKQ-------- 921

  Fly   960 SNLKHKTSEISVLKMKLELKKTLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHA 1024
              ||..:.:::||:.||.:   |.......|...:......|.::....:..::.:|||      
pombe   922 --LKSNSKKVTVLRNKLNI---LNNSLSKWKCLIKKPSDFSEPVSMDFTSNDEQLVQLL------ 975

  Fly  1025 QEEWISQKQTWRQENEELRRQIDEIIDMAKNAEV----NQRNQEDRMLAEIDNRELNEAYQRAIK 1085
                        |...:||:...::...||.:|:    :|..:|:     :.|  ..:|.|..:.
pombe   976 ------------QAESKLRQASQQLYMAAKKSELGFVQSQTAREN-----LSN--YYQALQMTVS 1021

  Fly  1086 DKEVIENENF---MLKEELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSK 1147
            :|...:.|..   :|...:.|.    ||:|.:                 .|..|::         
pombe  1022 EKFEYDTEQLPSRVLFYAMDRY----FSIHKK-----------------LKQLLEL--------- 1056

  Fly  1148 NYSYNDSTSLVVKLRSILEEE---KQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRSEY 1209
                     :.|:..|:|..|   ||...:|.|:.:...   |..:.:..||.|          :
pombe  1057 ---------VGVENASLLPNEVVNKQTKDLLYEKRVVFL---KQIKQALTVSSL----------F 1099

  Fly  1210 DQLRTSIKHGVEINELNAQHAALQEEVRRRREECIQLKAVLLQQSQSMRSLEPESLQMRGNDVNE 1274
            :.:  ..|.||                                    ||.||        .|.|.
pombe  1100 NAV--GYKDGV------------------------------------MRLLE--------TDQNS 1118

  Fly  1275 LMEAFHSQKLINRQLESELKAITEEHNSKLVEMTQEIERLNNEKDELQKVMFESIDEFEDSNVD- 1338
            |:.|.....||...:..:||....|..|:|.....:|                         || 
pombe  1119 LLFAGVVNFLIFAGISLDLKTQISEFLSQLCSYFTKI-------------------------VDG 1158

  Fly  1339 TLRQNDR---YLRRELQKAVAQFLLVQEELKLANAKLKAYRQDGGQLEHKIEE---EMIRNKSNG 1397
            |:.:||:   :..:.||..:..|..:                      |||..   .::...|:|
pombe  1159 TVIENDKTLDFYEKPLQAVLYWFATL----------------------HKIRSFLVHLLSINSHG 1201

  Fly  1398 TSADVGANVTKQKSQNPQGLMKF--HSSDLD----KILQRLLSALTPRTVVGLLPGFPAYLIFMC 1456
            ..:.|      :...||. ::||  |.|:|:    .::|:|||..|..::..||..       .|
pombe  1202 KQSVV------EDLWNPL-ILKFSKHFSNLENSFHSLVQKLLSCCTEGSINALLNS-------KC 1252

  Fly  1457 IRYTDLTNADDDVRELLSKFVIQIKKMHRTPHPIENRVIWLVNSITLLNLMKQYGDVDEYVKFNT 1521
            :  .:..:|.|:               :.||                                  
pombe  1253 L--PEFIDAADE---------------NTTP---------------------------------- 1266

  Fly  1522 EKQNQQQLKNFNLFEYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDEIQRGRQAHGMRSR 1586
                    ...|::|    ::|. :||...|:  |...|.|.::..     .|....|..|.|:.
pombe  1267 --------TGMNIYE----LIDR-MNLIHKLL--ISSALQPNLLEL-----TISHMLQHIGQRAF 1311

  Fly  1587 ATSIGASSSPEHGGGPAWKQLIGQLEHFYKQFQHFGLDNCYAEQIFHQLLYFICAVALNCLMLRG 1651
            .|.|       ||..|                        |.                       
pombe  1312 QTLI-------HGRSP------------------------YT----------------------- 1322

  Fly  1652 DICMWETGMIIRYNIGCIEDWVRSKKMSNDVLTALAPLNQVSQLLQSRKSE-QDVQTICDLCTSL 1715
                |::...:.||...:.:|...|.:|. |.::|.||.|...:...||:: .|:..|..:|..|
pombe  1323 ----WKSASQVSYNASLLINWCHQKGISY-VNSSLLPLMQSPLVFCLRKNDANDLDVILSVCNLL 1382

  Fly  1716 STAQVLKVMKSYKLDDYESEITNVFLEKLTEKLNARQMQ 1754
            |..:|:.::..|:....|:.:...| .|..|.|:.:..|
pombe  1383 SPFEVVCLLNRYQPCAGENPLPKSF-SKAVEALSCKYKQ 1420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 294/701 (42%)
IQ 900..922 CDD:197470 6/21 (29%)
SMC_prok_B <942..1365 CDD:274008 72/436 (17%)
Myo5_CBD 1424..1792 CDD:271254 58/336 (17%)
myo51NP_596233.1 COG5022 1..1471 CDD:227355 507/1794 (28%)

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