DRSC/TRiP Functional Genomics Resources

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Protein Alignment didum and Myh11

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_001416853.1 Gene:Myh11 / 24582 RGDID:3136 Length:1979 Species:Rattus norvegicus


Alignment Length:2082 Identity:558/2082 - (26%)
Similarity:902/2082 - (43%) Gaps:536/2082 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRNPAILVGQNDLTTL 78
            :|||.....:|:|:::|  .||...:....::||    |:.....|:..: ||.......|:..|
  Rat    36 VWVPSEKQGFEAASIKE--EKGDEVVVELVENGK----KVTVGKDDIQKM-NPPKFSKVEDMAEL 93

  Fly    79 SYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGDLEPHIFAL 143
            :.|:|..||||||.|:.. .:||||.|:..|.:|||..:|:|...|:..|:|....::.|||:|:
  Rat    94 TCLNEASVLHNLRERYFS-GLIYTYSGLFCVVVNPYKHLPIYSEKIVDMYKGKKRHEMPPHIYAI 157

  Fly   144 AEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGS------ESETQ--------VE 194
            |:.||..:.::..:.||:.:||||||||.:.|..::|.|.|..|      .|.||        :|
  Rat   158 ADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDSSITQGPSFAYGELE 222

  Fly   195 RKVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQG 259
            :::|.::||:||||||||.:||||||||||.::.| :..|  ::.||.:.||||||||.:.||:.
  Rat   223 KQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINF-DVTG--YIVGANIETYLLEKSRAIRQARD 284

  Fly   260 ERNYHIFYQLCA-ARSKY-PELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQ 322
            ||.:||||.|.| |:.|. .:|:|:..:.:.||:.|..| |....|.|.|.||::||:::|||.:
  Rat   285 ERTFHIFYYLIAGAKEKMRNDLLLESFNSYTFLSNGFVP-IPAAQDDEMFQETLEAMSIMGFSEE 348

  Fly   323 QIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLM 387
            :...|:|:::.:|.|||| |.||      |.::|...:..|.. .|....|:.::..|..|.:|.
  Rat   349 EQLAILKVVSSVLQLGNI-VFKK------ERNTDQASMPDNTA-AQKVCHLVGINVTDFTRAILT 405

  Fly   388 RKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQ-CSFIGVLDIYGF 451
            .:|:...:.|....:.|.|..|.:||||..|.:||::|:..:||:|:...:| .||:|:|||.||
  Rat   406 PRIKVGRDVVQKAQTKEQADFAIEALAKATYERLFRWILSRVNKALDKTHRQGASFLGILDIAGF 470

  Fly   452 ETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDF-YDNQPCIDLIE---SR 512
            |.||||||||.||||.||||||.||..:|.||||||.:|||.|..||| .|.||||:|||   :.
  Rat   471 EIFEVNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPNNP 535

  Fly   513 LGVLDLLDEECRMPKGSDESWAGKLIGKCNKFPHFEKPR--FGTTSFFIKHFSDTVEYDVNGFLE 575
            .|||.||||||..||.:|:|:..||..:....|.|:||:  ...|.|.|.|::..|:|:.:.:|.
  Rat   536 PGVLALLDEECWFPKATDKSFVEKLCSEQGNHPKFQKPKQLKDKTEFSIIHYAGKVDYNASAWLT 600

  Fly   576 KNRDTVSKELTQVLSESNMSLAKQVMTL-EEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRR 639
            ||.|.::..:|.:|   |.|..|.|..| :::|              |:|   |..|....|...
  Rat   601 KNMDPLNDNVTSLL---NASSDKFVADLWKDVD--------------RIV---GLDQMAKMTESS 645

  Fly   640 VVPSKQHRK----TVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACG 700
            :..:.:.:|    |||..::|.|..|::||..|||::||||.||.:|.:.|.:...:::|||..|
  Rat   646 LPSASKTKKGMFRTVGQLYKEQLGKLMTTLRNTTPNFVRCIIPNHEKRSGKLDAFLVLEQLRCNG 710

  Fly   701 VLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKN--DMKLSCRNIVMKWIQDEDKYRFGNTQ 763
            |||.:||...|||:|.::.:|..||::|. .:.:.|.  |.|.:|..::.....|.:.||.|.::
  Rat   711 VLEGIRICRQGFPNRIVFQEFRQRYEILA-ANAIPKGFMDGKQACILMIKALELDPNLYRIGQSK 774

  Fly   764 IFFRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARER-TQK 827
            ||||.|.:|.||:.|.                       |:|..||...|...||||||:. |::
  Rat   775 IFFRTGVLAHLEEERD-----------------------LKITDVIMAFQAMCRGYLARKAFTKR 816

  Fly   828 MREARAGLILSKYARGWLCRR--RYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVR 890
            .::..|..::.:....:|..|  ::.||...:..:....|   ...:..|..:..:.:: :|..:
  Rat   817 QQQLTAMKVIQRNCAAYLKLRNWQWWRLFTKVKPLLQVTR---QEEEMQAKEEEMQKIK-ERQQK 877

  Fly   891 GALARRAYQKRRRNIIICQAAIRRFLARRKFKRMKAEAKTISHMEN-------KYMGLENKIISM 948
            .....:..::|.     .|.|..:.|.:   ::::||.:..:..|.       |...||..:..|
  Rat   878 AESELKELEQRH-----TQLAEEKTLLQ---EQLQAETELYAEAEEMRVRLAAKKQELEEILHEM 934

  Fly   949 QQRIDELNRDNS---------------NLKHKTSEISVLKMKLELKK-TLEAEFKNVK---AACQ 994
            :.|::| ..|.|               :|:.:..|....:.||:|:| |.||:.|.::   ....
  Rat   935 EARLEE-EEDRSQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDDILVMD 998

  Fly   995 DKDKLIEALNKQLE----------AERDEKMQLLEENGHAQEEWISQ-------KQTWRQENEEL 1042
            |::..:....|.||          ||.:||.:.|.:.....|..||:       ::..|||.|:|
  Rat   999 DQNNKLSKERKLLEERVSDLTTNLAEEEEKAKNLTKLKSKHESMISELEVRLKKEEKSRQELEKL 1063

  Fly  1043 RRQI--------DEIID-----------MAK------------NAEVNQRN-------------- 1062
            :|::        ::|.|           :||            :.|:.|:|              
  Rat  1064 KRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDEEITQKNNALKKIRELEGHVS 1128

  Fly  1063 --QED-------RMLAEIDNRELNE----------------AYQRAIKDKEVIENENFMLKEELS 1102
              |||       |..||...|:|.|                |.|:.::.|.  |.|..|||:.|.
  Rat  1129 DLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKR--EQEVTMLKKALD 1191

  Fly  1103 RLTAGSFS-------LHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSKNYSYNDSTSLVVK 1160
            ..|....:       .|.:.....:.|.|.   :..||..||       .||.....::..|..:
  Rat  1192 EETRSHEAQVQEMRQKHTQAVEELTEQLEQ---FKRAKANLD-------KSKQTLEKENADLAGE 1246

  Fly  1161 LRSILEEEKQ----KHKVLQEQYIKLSSR-----HKPTEDSFRVSELEVENEKLRSEYDQLR-TS 1215
            || :|.:.||    |.|.|:.|..:|.|:     ...||.|.:|.:|:.|.|.:....::.. .:
  Rat  1247 LR-VLGQAKQEVEHKKKKLEGQLQELQSKCSDGERARTELSDKVHKLQNEVESVTGMLNEAEGKA 1310

  Fly  1216 IKHGVEINELNAQ----HAALQEEVRRRREECIQLKAVLLQQSQSMRSLEPE--SLQMRGNDVNE 1274
            ||...|:..|.:|    ...||||.|::           |..|..:|.||.|  |||   :.::|
  Rat  1311 IKLAKEVASLGSQLQDTQELLQEETRQK-----------LNVSTKLRQLEDERNSLQ---DQLDE 1361

  Fly  1275 LMEAFHSQKL------INRQLESELKAITEEHNSKLVEMTQEIERLNNEKDELQKVM-------- 1325
            .|||  .|.|      :|.||....|        ||.::...||.:...|..|||.|        
  Rat  1362 EMEA--KQNLERHVSTLNIQLSDSKK--------KLQDLASTIEVMEEGKKRLQKEMEGLGQQYE 1416

  Fly  1326 -----FESID--------EFEDSNVDTLRQN-------------DRYLRRE-------------- 1350
                 ::.::        |.:|..||...|.             |:.|..|              
  Rat  1417 EKAAAYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQLLAEEKNISSKYADERDRA 1481

  Fly  1351 -------------LQKAVAQFLLVQEELKLANAKLKA-------YRQDGGQLEHKIE-------- 1387
                         |.:|:.:.|..:|||:..|..|||       .:.|.|:..|::|        
  Rat  1482 EAEAREKETKALSLARALEEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRALET 1546

  Fly  1388 --EEM------IRNKSNGT------------------SADVGANVTKQKSQNPQGLMKFHSSDL- 1425
              |||      :.::...|                  ..|:.|...:.:.:..|...:.|..:. 
  Rat  1547 QMEEMRTQLEELEDELQATEDAKLRLEVNMQALKGQFERDLQARDEQNEEKRRQLQRQLHEYETE 1611

  Fly  1426 --DKILQRLLSALTPRTVVGLLPGFPAYLIFMCIRYTDL-TNADDDVR------ELLSKFVIQIK 1481
              |:..||.|:|...:.:.|.|              .|| ..||..|:      :.|.|...|:|
  Rat  1612 LEDERKQRALAAAAKKKLEGDL--------------KDLELQADSAVKGREEAIKQLRKLQAQMK 1662

  Fly  1482 KMHRTPHPIENRVIWLVNSITLLNLMKQYGDVDEYVKFNTEKQNQQQLKNFNLFEYRRVILDLIV 1546
            ...|                   .|.......||.  |.|.|:|:::.|:.              
  Rat  1663 DFQR-------------------ELDDARASRDEI--FATSKENEKKAKSL-------------- 1692

  Fly  1547 NLYQALIMQIQGLLDPKIVPAILNNDEIQRGRQAHGMRSR--ATSIGASSSPEHGGGPAWKQL-- 1607
               :|.:||:|..|           ...:|.|:...:...  |..:.:|.|..:......::|  
  Rat  1693 ---EAELMQLQEDL-----------AAAERARKQADLEKEELAEELASSLSGRNTLQDEKRRLEA 1743

  Fly  1608 -IGQLEHFYKQFQHFGLDNCYAEQIFHQLLYFICAVALNCLMLRGDICMWETGMIIRYNIGCIED 1671
             |.|||...::                                       |.|     |:..:.|
  Rat  1744 RIAQLEEELEE---------------------------------------EQG-----NMEAMSD 1764

  Fly  1672 WVR-----SKKMSNDVLT----------ALAPLNQVSQLLQSRKSEQDVQTICDLCTSLST--AQ 1719
            .||     ::::||:::|          |...|.:.::.|:|:..|.:......|.::::.  |:
  Rat  1765 RVRKATLQAEQLSNELVTERSAAQKNESARQQLERQNKELRSKLQEVEGAVKAKLKSTVAALEAK 1829

  Fly  1720 VLKVMKSYKLDDYESEITNVFLEKLTEKLNARQMQKSNSDEFTIDQKFIQPFKVVFRYSDIKLED 1784
            ::::.:..:.:..|.:.....|::..:||....:|..:      ::|.::.:|......:.|::.
  Rat  1830 IVQLEEQIEQEAREKQAATKLLKQKDKKLKEVLLQVED------ERKMVEQYKEQAEKGNTKVKQ 1888

  Fly  1785 IE 1786
            ::
  Rat  1889 LK 1890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 284/712 (40%)
IQ 900..922 CDD:197470 4/21 (19%)
SMC_prok_B <942..1365 CDD:274008 138/618 (22%)
Myo5_CBD 1424..1792 CDD:271254 64/395 (16%)
Myh11NP_001416853.1 None

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