DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and Myo16

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:XP_006508841.1 Gene:Myo16 / 244281 MGIID:2685951 Length:1941 Species:Mus musculus


Alignment Length:1354 Identity:324/1354 - (23%)
Similarity:570/1354 - (42%) Gaps:309/1354 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DLVWESAT---LEESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRNPAILVGQNDLTTLSYL 81
            |::::..|   .::..:.|.....:.::.||.::|::      :||       ...:||.|||.|
Mouse   382 DIMFKDTTKGLCKQESQDGPPETSMTSNCGKPEQVQV------MPP-------APSDDLATLSEL 433

  Fly    82 HEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAY---RGHAMGDLEPHIFAL 143
            ::..:|:.::.||...| |:|:.|.|.:.:||:.|:|:|...:.:.|   .|.....|.||:|:.
Mouse   434 NDSSLLYEIQKRFGNDQ-IHTFIGDIFLLVNPFKELPIYSTMVSQMYLSPTGQRSPSLPPHLFSC 497

  Fly   144 AEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVERKVLASSPIMEAFG 208
            ||.|:.:|.:|....:||:|||.|:|||.::|..|:|..: ..|.|.|..:.::..:..|:||||
Mouse   498 AERAFHRLFQERKPQNIILSGERGSGKTQASKQIMKYLTS-RASSSCTMFDSRLRHAIYIVEAFG 561

  Fly   209 NAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYHIFYQLCAAR 273
            :||||.|:.||...::.:|....:.  ..:.||.:.||:|||||||.|..|:..:.||..|....
Mouse   562 HAKTTLNNVSSCLIQYWELQCCQRR--KHITGARISTYMLEKSRVVAQPPGQGTFLIFSWLMDGL 624

  Fly   274 SKYPELVLDHQDKF---QFLNMGGAPEI---ERVSDAEQFNETVQAMTVLGFSIQQIADIVKILA 332
            |...:..| |.:.|   ::::.|...::   |...:.|:......|:.|:|||..::.::..||:
Mouse   625 SSEEKCGL-HLNNFCAHRYVSQGMREDVSTAEHSLNKERLAALKHALNVIGFSTLEVENLFVILS 688

  Fly   333 GILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIH-LQITADLLRVSADDLRRWLLMRKIESVNEY 396
            .|||:|:||.:     ...|.||    .|.:|:. |:..|.:|:||.|:|...|.........:.
Mouse   689 AILHIGDIQFT-----ALTEADS----AFVSDLQLLEQVAGMLQVSTDELASALTTDIQYFKGDV 744

  Fly   397 VLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNN----GSKQCSFIGVLDIYGFETFEVN 457
            ::..::|:.|...||.|||.:|::||.:::..:|..|.|    .|.|...||:|||:|||.|:.|
Mouse   745 IIRRHTIQMAAFYRDLLAKSLYSRLFGFLINTVNCCLQNQDEYKSLQTLDIGILDIFGFEEFQKN 809

  Fly   458 SFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWT----------MIDFYDNQPCIDLIESR 512
            .|||.|:|..|||:.....:.:|..||.|.::||:...          ::||:..:|.       
Mouse   810 EFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETACSPGNQAGVLDFFFQKPS------- 867

  Fly   513 LGVLDLLDEECRMPKGSDESWAGK---------LIGKCNKFPHFEKPRFGT---------TSFFI 559
             |...|||||      |...|:|:         |:...|....:...:.|.         .:|.:
Mouse   868 -GFFSLLDEE------SQVIWSGEPNLPRKLQGLLESSNTNAVYSPVKDGNGNVAFKGQGAAFTV 925

  Fly   560 KHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESNMSLAKQVM--TLEEIDTLCVDSAKSSTLGGR 622
            .|::..|.|::.|.:|:|:|::|:.|..|:..|...:...:.  .|.:..:| :.|..|...||.
Mouse   926 MHYAGRVMYEMGGAVERNKDSLSQNLLFVMKTSENVVISHLFQSKLSQTGSL-ISSYPSFKFGGH 989

  Fly   623 --------------------VVISAGRKQQGNDT----RRRVVPSKQHRKTVGSQFQESLASLIS 663
                                :.:|...|::|..|    ..|..|:     |..||..:|||.:.:
Mouse   990 KSTLLSKRTASSMVGVNKNYLELSKLLKKKGTSTFLQRLERGEPA-----TAASQLTKSLADITA 1049

  Fly   664 TLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLL 728
            .|...:||::.|||||..::...::...:..||:..|||..||:..:|:|.|..:.||..||:.|
Mouse  1050 KLQRGSPHFILCIKPNTSQLPGVFDHFYVSAQLQYLGVLGLVRLFRSGYPVRPSFEDFLSRYEPL 1114

  Fly   729 --VYRSKLDKNDMKLSCRNIVMK-----WIQDEDKYRFGNTQIFFRAGQVAFLEQVRANLRKKYI 786
              |...:......:..||.::.:     |       :.|..::|.:...|..|..:...|::|.:
Mouse  1115 ASVLLGETKGQAAEERCRLVLQRCKLQGW-------QIGVHKVFLKYWHVDQLSDLWLQLQRKIV 1172

  Fly   787 TIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLILSKYARGWLCRRRYL 851
            |                 .||||       ||:|||:...:....:...:.|        .:.:|
Mouse  1173 T-----------------CQKVI-------RGFLARQHLLQRMSIKQQEVTS--------IKSFL 1205

  Fly   852 RLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALARRAYQKRRRNIIICQAAIRRFL 916
            :....:: ::|| ..::.:|.....|:|.|           |.:..:....||            
Mouse  1206 QSTEDMA-LKTY-DALVIQNASDIAREHDR-----------LRKEVHTAYHRN------------ 1245

  Fly   917 ARRKFKRMKAEAK-TISHMENKYMGLENKIISMQQRI-----------DELNRDNSNLKHKTSEI 969
             |::....:||.: ...|:.:..:.:...:.|:.|.:           ...:.|:|.......:.
Mouse  1246 -RQEEGTKRAEDQGGCRHVHSNSVPVPMVVDSLAQALTGPSTRPPSLHSVFSMDDSTGLPSPRKQ 1309

  Fly   970 SVLKMKLELKKTLEAEFKNVKAACQD--KDKLIEALN------------KQLEAERDEKMQLLEE 1020
            ...|.|.:....|.|.::.| :||..  ||...|||.            |::...:.::....:.
Mouse  1310 PPPKPKRDPNTRLSASYEAV-SACLSAAKDAAGEALTRPRPHSDDYSTMKKIPPRKPKRSPHTKL 1373

  Fly  1021 NGHAQEEWISQKQT------------------WRQENE--ELRRQI------------DE----I 1049
            :|..:|.|...:.:                  |.:.:.  :...|:            |:    .
Mouse  1374 SGSYEEIWGPPRPSGTMGQGGRHQAPGTLSVQWARPDSVPQCTPQLPLHLPLPQGDYDDDAEPVY 1438

  Fly  1050 IDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENENFMLKEE---LSRLT----AG 1107
            |:|..||            |.....|.:...|    .:.|.|...::|.||   |..||    :.
Mouse  1439 IEMVGNA------------ARAGGSETDSPDQ----GESVYEEMKYILPEEGCGLGMLTFLPASP 1487

  Fly  1108 SFSLHARKA--SNASSQNEDDVGYASAKNTLDI---------NRPPDL------LSKNYSYNDS- 1154
            ...|..|||  ..|:..|     ...:|:|.||         :|||.|      ::::.:.::| 
Mouse  1488 PLFLETRKAIILEAAEGN-----CQPSKDTCDIPPPFPNLLPHRPPLLVFPPTPVTRSPASDESP 1547

  Fly  1155 -TSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVENEKLRS 1207
             |.|.||...:| |...|:.|..|....||.::...:..        :|::|.|
Mouse  1548 LTPLEVKKLPVL-ETNLKYPVQSEGSSPLSPQYSKAQKG--------DNDQLAS 1592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 214/757 (28%)
IQ 900..922 CDD:197470 3/21 (14%)
SMC_prok_B <942..1365 CDD:274008 67/353 (19%)
Myo5_CBD 1424..1792 CDD:271254
Myo16XP_006508841.1 ANKYR 81..336 CDD:440430
ANK repeat 114..145 CDD:293786
ANK repeat 147..178 CDD:293786
ANK repeat 180..210 CDD:293786
ANK repeat 243..274 CDD:293786
ANK repeat 276..307 CDD:293786
MYSc_Myo16 436..1153 CDD:276844 214/757 (28%)
NYAP_N 1235..1605 CDD:464717 73/402 (18%)
Blue background indicates that the domain is not in the aligned region.

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