DRSC/TRiP Functional Genomics Resources

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Protein Alignment didum and Radil

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:XP_006504745.1 Gene:Radil / 231858 MGIID:2443088 Length:1122 Species:Mus musculus


Alignment Length:672 Identity:126/672 - (18%)
Similarity:248/672 - (36%) Gaps:178/672 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1168 EKQKHKVLQEQYIKLSSRHKPTEDSFRVSELEVEN--EKLRSEYDQLRTSIKHGVEINELNAQHA 1230
            :.:|..::||.:       ||.|...|..||..::  |:|.|......|:        .:|||..
Mouse   165 DNEKPLLIQELW-------KPREGLSRRFELRKKSDVEELASRDVDTTTA--------GINAQAR 214

  Fly  1231 ALQEEVRRRREECIQLKA------VLLQQSQSMRSLE-----PESLQMRGNDVNELM--EAFHSQ 1282
            .|| .:|.:....:..:|      ..|:::.|..||.     ||:.|.....|.|.|  ..:...
Mouse   215 RLQ-RIRAKGTPALTSEAAQSSPPTRLRRTVSETSLSPAPSLPEAAQRPEEPVPEAMRYSLYQCP 278

  Fly  1283 KLINRQLESELKAITEEHNSKLVEMTQEI----ERLNNEKDELQ--------------------- 1322
            .|:      .|:..:::|:|.:..:::|.    :|..:.|..:.                     
Mouse   279 HLL------LLQGYSQQHDSLVYVLSKERHTVGQRTPSSKPSISLSAPDILPLHCTIRRHQSPEG 337

  Fly  1323 -----KVMFESIDEFEDS-NVDTLRQNDRYLRR-ELQKAVAQFLLVQEE-----------LKLAN 1369
                 :::.|.|.....| |...:.:|...|:. :|......:||:.::           |....
Mouse   338 GPAGTRLVLEPITGASVSVNFSEVGRNPVVLQHGDLLSLGLYYLLLFKDPGQAQPLPACALARLG 402

  Fly  1370 AKLKAYRQDGGQLEHKIEEEMIRNKSNGTSADVGANVTKQKSQNPQGLMKFHSSDLDKILQRLLS 1434
            |..::.|..|..|           ::.| :..:.|.|.:::|.    |::|.....|.:|||:::
Mouse   403 AAPQSCRMCGAVL-----------RARG-APSLPAAVVRRRSL----LLEFEPDVEDTLLQRIMT 451

  Fly  1435 ALTPRTVVGLLPGFPAYLIFMCIRYTDLTNADDDVRELLSKFVIQIK------------KMHRTP 1487
            .:.|......|.  ||:|:.:||:::.:.......|.||.|...:::            |..:..
Mouse   452 LIEPGGDDHKLT--PAFLLCLCIQHSAMHFQPGTFRHLLLKISKRVRDTVWEKTKELAEKQAQLQ 514

  Fly  1488 HPI--------------ENRVIWLVNSITLLNLMKQYGDVDEYVKFNTEKQNQQQLKNFNLF--- 1535
            .||              ::.:.|:.|||.||..::|...:  ||:...|:.:....|. :||   
Mouse   515 EPISWASFPMADLVPDLQHILFWMSNSIELLYFIQQKSPL--YVQSMEEELDVTGSKE-SLFSCT 576

  Fly  1536 -----EYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDEIQRGRQAHGMRSRATSIGASSS 1595
                 |....:.::::..:|..:..:...| ...:||:|.....|..|: ...||          
Mouse   577 LTASEEAMAALEEVVLYAFQQCVYYLSKCL-YVCLPALLECPPFQTERR-ESWRS---------- 629

  Fly  1596 PEHGGGPA----WKQLIGQLEHFYKQFQHFGLDNCYAEQIFHQLLYFICAVALNCLMLRGD--IC 1654
                 |||    .::::...:......|...:....|.|:...|.:|...:.||.::.:|.  .|
Mouse   630 -----GPALPEELRRVVSVFQATLDLLQQLQMHPEVASQMLAYLFFFSGTLLLNQVLDKGPSLSC 689

  Fly  1655 M-WETGMIIRYNIGCIEDWVRS-----------KKMSNDVLTALAPLNQVSQLLQSRKSEQDVQT 1707
            . |..|:.:...:....:|.||           :|:|..:.....|..|:.|:..:        |
Mouse   690 FHWPRGVQVCARLQQFLEWARSAGLGAPAERFFRKLSCTLHLLATPRAQLIQMSWA--------T 746

  Fly  1708 ICDLCTSLSTAQVLKVMKSYKL 1729
            :.....:|:.||:.:::..|:|
Mouse   747 LRVTFPALNPAQLHRLLTQYQL 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580
MYSc_Myo5 84..767 CDD:276831
IQ 900..922 CDD:197470
GBP_C <971..1086 CDD:303769
coiled coil 1049..1068 CDD:293879
coiled coil 1077..1086 CDD:293879
JAKMIP_CC3 <1190..1299 CDD:292653 27/123 (22%)
Myo5_CBD 1424..1792 CDD:271254 69/358 (19%)
RadilXP_006504745.1 RA_Radil_like 79..190 CDD:340636 9/31 (29%)
FHA 302..372 CDD:366133 8/69 (12%)
Myo5p-like_CBD_Rasip1 440..807 CDD:271256 69/359 (19%)
PDZ_signaling 1021..1105 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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