DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and hum-6

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_508420.1 Gene:hum-6 / 180539 WormBaseID:WBGene00002039 Length:2098 Species:Caenorhabditis elegans


Alignment Length:2252 Identity:534/2252 - (23%)
Similarity:845/2252 - (37%) Gaps:729/2252 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IWVPHADLVW-ESATLEESYRKGA-------GFLKICTDSGKLKEVKLKADGSDLPPLRNPAILV 70
            :.|...|.:| |....|.|...||       |.||:..|.|  .|..|.||..  ..|.:|..:.
 Worm     2 VLVSKGDFIWIEPGKTEGSIPIGARVIDQDHGRLKVIDDLG--NEQWLSADRR--VRLMHPTSVQ 62

  Fly    71 GQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGD 135
            |..|:..|...||..:|.||.:|:.|: :||.|.|.||:|:|||.::.:|....||.|:...:|:
 Worm    63 GVEDMCQLGDFHESAILRNLFIRYREK-LIYAYTGSILIAVNPYMDIAIYTADEIRMYKRKRIGE 126

  Fly   136 LEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVERKVLAS 200
            |.|||||:|:.|||.:.||..|.|:|:|||||||||.|.|..:::.|.:.|..|  .:|::||.:
 Worm   127 LPPHIFAIADNAYTNMRREKKNQSVIISGESGAGKTESTKLVLQFLATISGQHS--WIEQQVLEA 189

  Fly   201 SPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYHI 265
            :|::||||||||.||||||||||:..:.| |:.|  .::||.:..|||||||:|.|::.||||||
 Worm   190 NPVLEAFGNAKTIRNDNSSRFGKYIDVHF-NESG--SIEGAKIEQYLLEKSRIVTQSENERNYHI 251

  Fly   266 FYQLCA--ARSKYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQIADIV 328
            ||.|.|  :|.:..||.|.....:.:|..|.....|...||....|...||.||..:.|:|..|.
 Worm   252 FYCLLAGLSREEKSELELGTAADYYYLIQGKTLTAEGRDDAADLAEIRSAMRVLMINEQEIGSIF 316

  Fly   329 KILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMRKIESV 393
            |:||.:||:|||:..:..|:..|     |.|:......::| |.||::...:|...:..:.:.:.
 Worm   317 KLLASLLHIGNIRFRQNTNDNME-----SVDVADPSTLVRI-AKLLQLHEQNLLDAITTKSLVTR 375

  Fly   394 NEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSK-QCSFIGVLDIYGFETFEVN 457
            .|.|:...:.:.|..|||||||.||.|||.:||..:|.::...|: :.:.||:|||:|||.||.|
 Worm   376 EERVISRLNGQQAVDARDALAKAIYGKLFIHIVRRVNDAIYKPSQSRRTSIGILDIFGFENFESN 440

  Fly   458 SFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESR-LGVLDLLDE 521
            ||||.|||:|||.|||.|..||||:||:||.:|.|.|..|.|.|||..:|||..| |.:|.|:||
 Worm   441 SFEQLCINFANETLQQFFVHHVFKMEQKEYDEEHINWRHIKFVDNQATVDLIAQRPLNILSLIDE 505

  Fly   522 ECRMPKGSDESWAGKLIGKCNKFPHFEKPR------FGTTSFFIKHFSDTVEYDVNGFLEKNRDT 580
            |...|||:|::...||.....:...:.:|:      ||.|     ||:..|.|:..||||||||:
 Worm   506 ESIFPKGTDKTMLLKLHSTHGRNELYLQPKSELQRAFGVT-----HFAGNVFYNTRGFLEKNRDS 565

  Fly   581 VSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVVPSKQ 645
            .|.:|:.::|.|.|....::....|.||                          .:|::|     
 Worm   566 FSADLSVLISSSKMPFLARLFDDIEYDT--------------------------SSRKKV----- 599

  Fly   646 HRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAA 710
               |||:||:.||..|:|.|..|.|.::||||||:.|.|...:...:::|||..|::||::|..:
 Worm   600 ---TVGNQFRRSLEQLMSQLTQTHPFFIRCIKPNEMKRALVMDRDLVLRQLRYSGMMETIKIRRS 661

  Fly   711 GFPSRWLYPDFYMRYQLLV--YRSKLDKNDMKLSCRNIVMKWIQDEDKYRFGNTQIFFRAGQVAF 773
            |:|.|..|..|..||::||  .:..:::.|:..:.:.|....:.....|:.|.|::|.:......
 Worm   662 GYPIRHDYYPFVFRYRVLVSSIQGPVNRIDLHDAAKKICHMILGTNADYQLGKTKVFLKDKHDLV 726

  Fly   774 LEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLILS 838
            |||....:.|....::|..|||::.|:.|.:.::....||...||:..|:|.::        |:|
 Worm   727 LEQEYYRILKDKAIVIQKNVRRWLVRKDFEKQRQAAVTIQTAWRGFDQRKRYRQ--------IIS 783

  Fly   839 KYARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALARRAY-QKRR 902
            .::|    .:..||.|..:|..||..:.:               :|.|...||:|.||.. :||:
 Worm   784 GFSR----LQAVLRSRQLVSHYQTLRKTI---------------IQFQAVCRGSLVRRQVGEKRK 829

  Fly   903 RNIIICQAAIRRFLARRKFKRMKAEAKTIS--------HM------ENKYMGLENKIISMQQ--- 950
            |.            .:.....:.:.|..||        |:      :.|..|.||......:   
 Worm   830 RG------------EKAPLTEVSSTASVISDSHEELVGHLFDFLPSDGKDSGNENDSADSSRRGS 882

  Fly   951 ----------------RIDE-LNRDNSNL---KHKTSEISVLKMKLELKKTLE------------ 983
                            |:|. ::.|.|..   |:..:..........:||.|:            
 Worm   883 YSRLHTSPVMPPANIPRVDSYVDEDLSKYQFGKYAATFFQAQATATHVKKPLKTALLTHTEPSAQ 947

  Fly   984 --------------AEFKNVK------AACQDKD----KLIEALNKQLEAERDEKMQLLEENGHA 1024
                          .:..:||      :...||.    ||...|.|:..|...|:..|..|.|.|
 Worm   948 LAALTAWTTILRFMGDLADVKPGSTNGSEVYDKTPVMIKLYATLGKKFSAHDLEEAMLSSEYGGA 1012

  Fly  1025 QEEWISQKQTWRQENEELRRQID-EIIDMA--KNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKD 1086
                           :.|::.:. ::|.|.  :..::|..:     .:.|.:..:..::...:::
 Worm  1013 ---------------KTLKKGMGRKLISMTLKRKGKINGSD-----TSSISSDSVYSSFNAMLEN 1057

  Fly  1087 KEVIENENF-------MLKEEL----------------SRLTA-----------GSFSLHAR--- 1114
            |.:...:..       :|:|:|                |:|:|           |.|:...|   
 Worm  1058 KPMTSLDKLHYIIGLGILREDLRDEIYCQLCKQLSNNPSKLSAARGWILLSLCVGCFAPSERFIK 1122

  Fly  1115 -----------KASNASSQNEDDVGYASAKNTLDINRPPDL--LSKNYSYN-------------- 1152
                       ..:..|...||.:.......|.  ::||..  |..|.|..              
 Worm  1123 YLFCFIRERGPAGTGYSKYIEDRLRRTQVNGTR--HQPPSYVELQANKSQKPVVLAVTFMDGSVK 1185

  Fly  1153 ----DSTSLVVKLRSILEE---------------------------EKQKHKVLQ-EQYIKLSSR 1185
                ||.:...:|...|.|                           :.....:.| |||.|...|
 Worm  1186 TLCADSATTAAELCKQLAEKVGLTNSFGFSLYIALFDKVSSLGSGTDHVMDAISQCEQYAKEQGR 1250

  Fly  1186 -------------------HKPTEDSFRVSELEVENEKLRSEYDQLRTSIKHGVEINELNAQHAA 1231
                               |.|.:|....:.:          |.|:...||:|            
 Worm  1251 QERNAPWRLFFRKEIFSPWHDPRDDPVSTNLI----------YQQVIRGIKYG------------ 1293

  Fly  1232 LQEEVRRRREECIQLKAVLLQQ------SQSMRSLE---PESL---QMRGNDVNELMEAFHSQKL 1284
               |.|..::|  :|.|:..||      :..:..||   |..|   :|.|.::            
 Worm  1294 ---EYRCDKDE--ELAAICAQQYYIDEGTMDVNKLENNLPSYLPDFEMSGKEM------------ 1341

  Fly  1285 INRQLESELKAITEEHNSKL-------VEMTQEIERLNNEK------------------------ 1318
               .||...:.|..::..|.       :|:.:.:..:...|                        
 Worm  1342 ---ALEKWTQTIMHQYRKKFTGRLPSQIEVKENVVSVAKTKWPLLFSRFYEALKFAGPPLPKNEV 1403

  Fly  1319 ------------DELQKVMFE-SIDEF--------EDSNVDTLR----QNDRYLRR-----ELQK 1353
                        |:.:.||.| |..|.        :.|..||..    ..|.|..:     ::..
 Worm  1404 IIAVNWTGVYVVDDREHVMLEFSFPEISTAYYGKGKRSTTDTCTVRTVVGDEYTFQSPNADDITN 1468

  Fly  1354 AVAQFLLVQEELKLANAKLKAYRQDGGQLEHKIEEEMIRNKSNGTSADVGANVTKQKSQNPQGLM 1418
            .:..||   |.||..:..|.|                               :..||.......:
 Worm  1469 LIVMFL---EGLKKRSRYLVA-------------------------------IKSQKGDEKNNFL 1499

  Fly  1419 KFHSSDL----------DKILQRLLSALTPRT-VVGLLPGFPAYLIFMCIRYT------------ 1460
            :|...||          ..:.:.::.....|| :.||:.....|::...::.:            
 Worm  1500 EFEKGDLLILVNEFTGNTLLTESVVKGENSRTCLFGLIRAENVYVLPTLVKPSKNTLQIFPKDMD 1564

  Fly  1461 ---DLTNADDDVRELLSKFVIQIKKMHRTPHPIEN--------RVIWLVNSITLLNLMKQYGDVD 1514
               ||.|.:..|         .:...:..|:.:||        :|..:.:.|:|:.|.|:...: 
 Worm  1565 LSLDLFNNNKQV---------TVVDYNAEPYTLENFAEDNFNSQVKRVGSQISLMTLRKKESQI- 1619

  Fly  1515 EYVKFNTEKQNQQQLKNFN---------------LFEY--------RRVILDLIVNLYQALIMQI 1556
            |..:|:.|..:|..||..|               :.:|        .|:...|..:::: |.:.:
 Worm  1620 ECWRFSREHIDQPLLKKLNGREDACRGAIEIFAAIMKYMGDEPSKRSRLGTHLTDHIFK-LPISM 1683

  Fly  1557 QGLLDP---KIVPAILNNDEIQRGRQAHGMRSRATSIGASSSPEHGGGPAWKQLIGQLEHFYKQF 1618
            :.|.|.   ::|..:..|..|....:...:...||.:.|.|:          .|..::.||.|..
 Worm  1684 EALRDELYCQLVKQLTLNPSIMSEERGWELLWMATGLFAPSA----------ALAKEISHFLKSR 1738

  Fly  1619 QH-FGLDNCY---------------------------AEQIFHQLLY---FICAVALNCLMLRGD 1652
            .| ..|| |.                           ..||||::.:   ...|:.::......|
 Worm  1739 PHPIALD-CQNRMQKLAKGGSRKYPPHLVEVEAIQHKTTQIFHKVFFPDNTDEAIEVDSATRARD 1802

  Fly  1653 ICMWETGMIIRYNIG-------------------------------CIEDWVRS----------- 1675
            .|     ..|.|.:|                               .:.|||.:           
 Worm  1803 FC-----HKIGYRLGLKSSDGFSLFVKIKDKVLAVPESEFFFDYVRSLSDWVHTNHATQKDATMI 1862

  Fly  1676 ------------------------------------------KKMSNDV--LTAL---------- 1686
                                                      |...|||  |.||          
 Worm  1863 PINYQVYFMRKLWYNFVAGADPQADIIFHYHQESQKYLLGYHKTTKNDVIELAALILRSMTKDGK 1927

  Fly  1687 -APLNQVSQLLQSRKSEQDVQTICDLCTSLSTAQVLKVMKSYKLDDYESEITNVFLEKLTEKLNA 1750
             |||.|:.|||.....:..                   :|.|...::...|:|.:          
 Worm  1928 NAPLAQIPQLLDEIIPKDS-------------------LKMYSASEWRKTISNAY---------- 1963

  Fly  1751 RQMQKSNSDEFTID--------QKFIQPFKVVFRYSDIKLED 1784
            .:::...||:..|:        ..|...|..|.:|||:.|.|
 Worm  1964 ARIEHLKSDQAKIEFLNYICRWPTFGSAFFPVSQYSDLNLPD 2005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 273/694 (39%)
IQ 900..922 CDD:197470 3/21 (14%)
SMC_prok_B <942..1365 CDD:274008 100/672 (15%)
Myo5_CBD 1424..1792 CDD:271254 89/557 (16%)
hum-6NP_508420.1 MYSc_Myo7 76..720 CDD:276832 273/694 (39%)
CBD_MYO6-like 738..>808 CDD:409646 21/81 (26%)
IQ 757..779 CDD:197470 6/21 (29%)
MyTH4 929..1168 CDD:214535 39/260 (15%)
FERM1_F1_Myosin-VII 1172..1270 CDD:340612 11/97 (11%)
B41 1174..1388 CDD:214604 38/255 (15%)
FERM_C1_MyoVII 1382..1480 CDD:270019 16/100 (16%)
SH3 1481..1544 CDD:473055 11/93 (12%)
MyTH4 1624..1772 CDD:214535 27/159 (17%)
FERM2_F1_Myosin-VII 1777..1875 CDD:340613 13/102 (13%)
B41 1779..1993 CDD:214604 33/247 (13%)
FERM_C2_MyoVII 1989..2087 CDD:270020 7/17 (41%)

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