DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and Myo7a

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:XP_011239990.1 Gene:Myo7a / 17921 MGIID:104510 Length:2250 Species:Mus musculus


Alignment Length:1683 Identity:467/1683 - (27%)
Similarity:725/1683 - (43%) Gaps:384/1683 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DLVWESATLEESYRKGAG-FLKICTDSGKLKEVKLKADGSD------------LPPLRNPAILVG 71
            |.||......:.:....| .:|:| |||:::.|    |..|            :.|: :|..:.|
Mouse    37 DYVWMDLKSGQEFDVPIGAVVKLC-DSGQIQVV----DDEDNEHWISPQNATHIKPM-HPTSVHG 95

  Fly    72 QNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYC------GIILVAINPYAEMPLYGPSIIRAYRG 130
            ..|:..|..|:|.|:|.||.:|:.: .:|||.|      |.||||:|||..:.:|.|..||.|..
Mouse    96 VEDMIRLGDLNEAGILRNLLIRYRD-HLIYTSCGGRTYTGSILVAVNPYQLLSIYSPEHIRQYTN 159

  Fly   131 HAMGDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVER 195
            ..:|::.|||||:|:..|..::|.|.:...|:|||||||||.|.|..:::.||:.|..|  .:|:
Mouse   160 KKIGEMPPHIFAIADNCYFNMKRNNRDQCCIISGESGAGKTESTKLILQFLAAISGQHS--WIEQ 222

  Fly   196 KVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGE 260
            :||.::||:||||||||.||||||||||:..:.| |:.|.  ::||.:..||||||||..||..|
Mouse   223 QVLEATPILEAFGNAKTIRNDNSSRFGKYIDIHF-NKRGA--IEGAKIEQYLLEKSRVCRQAPDE 284

  Fly   261 RNYHIFYQLCAARSKYPE----LVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSI 321
            ||||:||  |.......|    |.|.....:.:|.||.....|...|::::.....||.||.|:.
Mouse   285 RNYHVFY--CMLEGMNEEEKKKLGLGQAADYNYLAMGNCITCEGRVDSQEYANIRSAMKVLMFTD 347

  Fly   322 QQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLL 386
            .:..:|.|:||.|||:||:|.     |....|:.|:|::..:. .|...|.||.|:..||...|.
Mouse   348 TENWEISKLLAAILHMGNLQY-----EARTFENLDACEVLFSP-SLATAASLLEVNPPDLMSCLT 406

  Fly   387 MRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSL--------NNGSKQCSFI 443
            .|.:.:..|.|..|.|.|.|...|||..|.||.:||.:||..:|.::        .|..:.   |
Mouse   407 SRTLITRGETVSTPLSREQALDVRDAFVKGIYGRLFVWIVEKINAAIYKPPPLEVKNSRRS---I 468

  Fly   444 GVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDL 508
            |:|||:|||.|.||||||.|||:|||.|||.|.:||||||||||..|.|.|..|:|.|||..:|:
Mouse   469 GLLDIFGFENFTVNSFEQLCINFANEHLQQFFVRHVFKLEQEEYDLESIDWLHIEFTDNQEALDM 533

  Fly   509 IESR-LGVLDLLDEECRMPKGSDESWAGKLIGKCNKFPHFEKPRFG-TTSFFIKHFSDTVEYDVN 571
            |.:| :.|:.|:|||.:.|||:|.:...||..:.....::..|:.. .|.|.|.||:..|.|:..
Mouse   534 IANRPMNVISLIDEESKFPKGTDATMLHKLNSQHKLNANYVPPKNSHETQFGINHFAGVVYYESQ 598

  Fly   572 GFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDT 636
            |||||||||:..::.|::..|.....||:..        .|.|                 .|.:|
Mouse   599 GFLEKNRDTLHGDIIQLVHSSRNKFIKQIFQ--------ADVA-----------------MGAET 638

  Fly   637 RRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGV 701
            |:|       ..|:.|||:.||..|:.||.|..|.:|||||||:.|....::....::|||..|:
Mouse   639 RKR-------SPTLSSQFKRSLELLMRTLGACQPFFVRCIKPNEFKKPMLFDRHLCVRQLRYSGM 696

  Fly   702 LETVRISAAGFPSRWLYPDFYMRYQLLV--YRSKLDKNDMKLSCRNIVMKWIQDEDKYRFGNTQI 764
            :||:||..||:|.|:.:.:|..||::|:  .:....:.|::.:|:.:....:...|.::.|.|:|
Mouse   697 METIRIRHAGYPIRYSFVEFVERYRVLLPGVKPAYKQGDLRGTCQRMAEAVLGTHDDWQIGKTKI 761

  Fly   765 FFRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMR 829
            |.:......||..|.......:.::|.|:|.|..|..|||::.....||:|.||:          
Mouse   762 FLKDHHDMLLEVERDKAITDRVILLQKVIRGFKDRSNFLRLKSAATLIQRHWRGH---------- 816

  Fly   830 EARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALA 894
                           .||:.|..:|.....:|...|......::...|.  |.::.|...|..|.
Mouse   817 ---------------HCRKNYELIRLGFLRLQALHRSRKLHKQYRLARQ--RIIEFQARCRAYLV 864

  Fly   895 RRAYQKRRRNIIICQAAIRRFLARRKFKRMKAEAKTISHMENKYMGLENKIISMQQRIDELNRDN 959
            |:|::.|...:|..||..|..:|||..:|::.|.:.....|...:..|.|               
Mouse   865 RKAFRHRLWAVITVQAYARGMIARRLHRRLRVEYQRRLEAERMRLAEEEK--------------- 914

  Fly   960 SNLKHKTSEISVLKMKLELKKTLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHA 1024
                        |:.::..||..|                        ||||..:.:|.:.....
Mouse   915 ------------LRKEMSAKKAKE------------------------EAERKHQERLAQLARED 943

  Fly  1025 QEEWISQKQTWRQENEELRRQIDEIIDMAKNAEVNQRNQEDRMLAEIDNR--------------E 1075
            .|..:.:|:..|::.|.|     |.::.|::..:|..:..|:|...:...              |
Mouse   944 AERELKEKEEARRKKELL-----EQMEKARHEPINHSDMVDKMFGFLGTSGSLPGQEGQAPSGFE 1003

  Fly  1076 LNEAYQRAIKDKEV-----IENENFMLKEELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNT 1135
            ..|..:|.:.:::|     :.:|:   :|:||......|:                ..|.....|
Mouse  1004 DLERGRREMVEEDVDAALPLPDED---EEDLSEYKFAKFA----------------ATYFQGTTT 1049

  Fly  1136 LDINRPPDLLSKNYSYNDS-----TSLVV--------------KLRSILEEEKQKHKVLQEQYIK 1181
            ....|.|  |.:...|:|.     .:|.|              |..:.:.:..:|..|:.:.|..
Mouse  1050 HSYTRRP--LKQPLLYHDDEGDQLAALAVWITILRFMGDLPEPKYHTAMSDGSEKIPVMTKIYET 1112

  Fly  1182 LSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIKHGVEINELNAQHAALQEEVRRR---REEC 1243
            |..:....|    :..|:.|.|....| .|.:||::|.: ::....:.:.|.|||.:|   .|..
Mouse  1113 LGKKTYKRE----LQALQGEGETQLPE-GQKKTSVRHKL-VHLTLKKKSKLTEEVTKRLNDGEST 1171

  Fly  1244 IQLKAVLLQQSQSMRSLEPESLQ-MRGNDV--NELMEAFHSQKLINRQLESELKAITEEHN-SK- 1303
            :|..::|..:..|    ..|.|. :.||.:  ..|.:..:.|  |::||         .|| || 
Mouse  1172 VQGNSMLEDRPTS----NLEKLHFIIGNGILRPALRDEIYCQ--ISKQL---------THNPSKS 1221

  Fly  1304 -------LVEMTQEIERLNNEKDELQKVMFESIDEFEDSNVDTLRQNDRYLRRELQKAVAQFLLV 1361
                   ||.:...              .|...::|.           :|||..:.         
Mouse  1222 SYARGWILVSLCVG--------------CFAPSEKFV-----------KYLRNFIH--------- 1252

  Fly  1362 QEELKLANAKLKAYRQDGGQLEHK--IEEEMIRNKSNGTSADVGANVTKQKSQNPQGLMKFHSSD 1424
                             ||...:.  .||.:.|...|||.....:.:..|.:::.:.:| ...:.
Mouse  1253 -----------------GGPPGYAPYCEERLRRTFVNGTRTQPPSWLELQATKSKKPIM-LPVTF 1299

  Fly  1425 LDKILQRLL--SALTPRTVVGLLP---------GFPAYLIFMCIRYTDLTNADDDVRELLSK--- 1475
            :|...:.||  ||.|.|.:...|.         ||..| |.:..:.:.|.:..|.|.:.:|:   
Mouse  1300 MDGTTKTLLTDSATTARELCNALADKISLKDRFGFSLY-IALFDKVSSLGSGSDHVMDAISQCEQ 1363

  Fly  1476 -------------FVIQIKKMHRTP--HPIENRVIWLVNSITLLNLMKQYGDVDEYVKFN----- 1520
                         :.:..:|...||  :|.|:.|        ..||:  |..|...|||.     
Mouse  1364 YAKEQGAQERNAPWRLFFRKEVFTPWHNPSEDNV--------ATNLI--YQQVVRGVKFGEYRCE 1418

  Fly  1521 -----TEKQNQQQLKNFNLFEYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDE 1573
                 .|..:||...::.    ..:||:.:::|....|.      |.:|.|  |.|.|
Mouse  1419 KEDDLAELASQQYFVDYG----SEMILERLLSLVPTYIP------DREITP--LKNLE 1464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 274/704 (39%)
IQ 900..922 CDD:197470 8/21 (38%)
SMC_prok_B <942..1365 CDD:274008 82/475 (17%)
Myo5_CBD 1424..1792 CDD:271254 42/189 (22%)
Myo7aXP_011239990.1 MYSc_Myo7 108..764 CDD:276832 274/704 (39%)
IQ 801..822 CDD:197470 8/45 (18%)
PTZ00121 <838..>1010 CDD:173412 41/229 (18%)
MAP7 <892..>970 CDD:461709 21/133 (16%)
MyTH4 1052..1288 CDD:214535 59/309 (19%)
FERM1_F1_Myosin-VII 1292..1390 CDD:340612 20/99 (20%)
B41 1294..1509 CDD:214604 43/195 (22%)
FERM_C1_MyoVII 1503..1639 CDD:270019
SH3_MYO7A 1640..1704 CDD:212814
MyTH4 1782..1931 CDD:214535
FERM2_F1_Myosin-VII 1936..2033 CDD:340613
B41 1938..2150 CDD:214604
FERM_C2_MyoVII 2146..2241 CDD:270020
Blue background indicates that the domain is not in the aligned region.

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