DRSC/TRiP Functional Genomics Resources

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Protein Alignment didum and hum-5

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_497809.1 Gene:hum-5 / 175521 WormBaseID:WBGene00002038 Length:1017 Species:Caenorhabditis elegans


Alignment Length:1063 Identity:325/1063 - (30%)
Similarity:515/1063 - (48%) Gaps:182/1063 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAMGD 135
            |..||..||.:....|:.||::|| ::..||||.|.:|||:|||.::.:|..|.:..|:|..:.:
 Worm    12 GVEDLVLLSTIDLKSVVQNLQLRF-QKGRIYTYIGEVLVAVNPYRQLGIYEKSTVDQYKGREIYE 75

  Fly   136 LEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVER---KV 197
            ..||:||:|:.||..::|...:..|::|||||||||.::|..|:|.||:.....:.::||   .:
 Worm    76 RAPHVFAIADAAYRSMKRFGRDSCIVISGESGAGKTETSKIIMKYLAAITNVRQQGEIERVKNVL 140

  Fly   198 LASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERN 262
            |.|:.|:||||.||||||||||||||:..:.|......:   |..:..|||||||||.|.:||||
 Worm   141 LRSNCILEAFGCAKTTRNDNSSRFGKYMHINFDYDGDPV---GGNISNYLLEKSRVVRQQEGERN 202

  Fly   263 YHIFYQLCAARS----KYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAM-TVLGFSIQ 322
            :|:||||.....    :...|..|.: ::.|||.|.:.::..::|:..|.|...|: ::..|..|
 Worm   203 FHVFYQLVNGGDDGLLRQFGLTKDAK-QYYFLNQGQSHKVASINDSRDFAEVQTALRSIHTFDKQ 266

  Fly   323 QIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLM 387
            .:..:..::||::||||:    :|.:|   |:|...........||..|..|.|:.|:|.:.|..
 Worm   267 DVESMWSVIAGLIHLGNV----RFIDG---ENSSGAVHIAEKAALQNAARCLNVTPDELAKSLSS 324

  Fly   388 RKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNK--SLNNGSK--QCSFIGVLDI 448
            :.:.:..:.|...:.:.||...||||||.:|.:||.::|..:|:  |:.|.|:  :...||||||
 Worm   325 QVVAAHGDIVKKQHDVNAAYYTRDALAKALYERLFSWMVSKVNEAISVQNSSRYSKSHVIGVLDI 389

  Fly   449 YGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIE-SR 512
            ||||.|..|||||.||||.||||||.|.:.|.|.|||||.:|||.|..|::::|:...||:| .|
 Worm   390 YGFEIFGTNSFEQLCINYCNEKLQQLFIELVLKQEQEEYEREGIKWVKIEYFNNKVICDLVEIPR 454

  Fly   513 LGVLDLLDEEC-RMPKGSDESWAGKLIGKCNKFPHF-------EKPRFGTTSFFIKHFSDTVEYD 569
            .|:|.:|||.| .:...:|:.:.|:|..|.....|:       .....|...|.|.|::..|.|.
 Worm   455 TGILSILDEACASIGNVTDKVFLGELDKKLKSHKHYTSRNLKQSDKSMGFEEFKITHYAGDVTYS 519

  Fly   570 VNGFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGN 634
            |.||::||:||:.::|.::|..|...|.|         :|..|.:||..                
 Worm   520 VMGFMDKNKDTLFQDLKRLLYHSKNRLVK---------SLFPDGSKSMA---------------- 559

  Fly   635 DTRRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRAC 699
            :..||       ..|.|..|:.|::.|:..|....|||:||||||::|.:..::..::..|:|..
 Worm   560 EVNRR-------PPTAGFLFKNSMSELVKQLAQKEPHYIRCIKPNEEKNSNVFDLERVEHQVRYL 617

  Fly   700 GVLETVRISAAGFPSRWLYPDFYMRYQLL---VYRSKLDKNDMKLSCRNIVMKWIQDEDKYRFGN 761
            |:||.||:..|||..|..|..|..||:|:   .:.:......:|.||..|:......:|..: |.
 Worm   618 GLLENVRVRRAGFAHRMPYDRFVNRYKLICASTWPNPRRGQQLKDSCMQILESAGLAQDCVQ-GR 681

  Fly   762 TQIFFRAGQVAF-LEQVRANLRKKYITIVQSVVR----RFVYRRQFLRIQKVINGIQKH-ARGYL 820
            |:||.|:.|..| ||::|.......||.:|.:||    |..||| .|.::|:|...::: .:.|:
 Worm   682 TKIFIRSPQTVFRLEELRTEQLPNVITFLQKMVRGVQQRERYRR-MLAVRKIIGAYRRYKLKSYI 745

  Fly   821 -----ARERTQKMREA---------------------------RAGLILSK-------------- 839
                 |....::||:.                           ||..||::              
 Worm   746 WQLINAFRDVRRMRDLGKSIRWPAPPLVLAQFVSRLRVMHQRWRAATILARMPPHLRASLPQKIA 810

  Fly   840 -------------YARGWLCRRRYLRLRHSI---SGIQTYARGMLARNKFHAMRDHYRAVQIQRF 888
                         |.|.|  |..||..:..:   :.:.||..|:.|..:.|.......:..:|:|
 Worm   811 AFEVLNNKKENWGYTRMW--RGDYLSQQEELELPTTVSTYHDGIQALRQSHPFGKVLFSTYVQKF 873

  Fly   889 VRGALARRAYQKRRRNIIICQAAIRRFLAR---RKFKRMK--------------AEAK--TISHM 934
                   ..:.|....::|   ...||:|:   :|||.:|              ||:.  .:.|:
 Worm   874 -------NKFNKSSLRVLI---VTDRFVAKLENKKFKLLKEPIPLQSISRISVCAESNGLFVIHV 928

  Fly   935 -ENKYMGLENKIISMQQRI-----------DELNRDNSNLKHKTSEISVLKMKLELKKTLEAEFK 987
             :|..:|.. |....::|:           |::....|.:..:::.:..|..|....:..:||..
 Worm   929 GDNDIVGCA-KNTKNEERVGEMIGTLLAHYDKITMRRSPVLIQSAVVCTLGGKTRTIRVFDAENN 992

  Fly   988 NVKAACQDKDKLIEALNKQLEAE 1010
            ||....:.....::.:..||.|:
 Worm   993 NVPPVFKKNGNDVDLICHQLTAQ 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 254/706 (36%)
IQ 900..922 CDD:197470 6/24 (25%)
SMC_prok_B <942..1365 CDD:274008 13/80 (16%)
Myo5_CBD 1424..1792 CDD:271254
hum-5NP_497809.1 MYSc 6..699 CDD:214580 264/731 (36%)
Myosin_TH1 808..986 CDD:461801 33/190 (17%)
Blue background indicates that the domain is not in the aligned region.

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