DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and nmy-2

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_492186.3 Gene:nmy-2 / 172562 WormBaseID:WBGene00003777 Length:2003 Species:Caenorhabditis elegans


Alignment Length:1855 Identity:468/1855 - (25%)
Similarity:815/1855 - (43%) Gaps:400/1855 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SEEMLYAQGAKIWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDLPPLRNPA 67
            ||:..:|.||.|..||||...:...:|...|:                 ::.:|....|   ||.
 Worm    39 SEKDGFALGAVIGEPHADGTIDIELMETGERQ-----------------RVSSDDCQKP---NPP 83

  Fly    68 ILVGQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHA 132
            ......|::.|:.|:|..|||||:.|:.. .:.|||.|:..|.||||..:|:|..:|...::...
 Worm    84 KYDKCEDMSMLTCLNEASVLHNLKQRYFS-NLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKK 147

  Fly   133 MGDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGS---------- 187
            ..::.|||||:|:|||..:.:|..:.||:.:||||||||.:.|..::|.|.|...          
 Worm   148 RKEMPPHIFAVADEAYRSMLQERDDQSILCTGESGAGKTENTKKVIQYLAYVANRSMVKNRKTSV 212

  Fly   188 --ESET-----QVERKVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHT 245
              ::.|     |:|.::|.::||:|||||:||.:||||||||||.::.| :..|.  :.||.:..
 Worm   213 DLDTSTNRIMGQLEEQLLQANPILEAFGNSKTVKNDNSSRFGKFIRVHF-DSTGC--ISGANIEF 274

  Fly   246 YLLEKSRVVYQAQGERNYHIFYQLCAARSKYPE---LVLDHQDKFQFLNMGGAPEIERVSDAEQF 307
            ||||||||:.||..||::||||||....||...   |:.|...|::|::.|.: ::..|.|..:.
 Worm   275 YLLEKSRVLKQAPNERSFHIFYQLLKGLSKVQREHYLLEDSLSKYKFVSNGDS-KLAGVDDGAEM 338

  Fly   308 NETVQAMTVLGFSIQQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITAD 372
            .||:.||:::|.:.::|..|:::::.::..||::.|      .|.:::|.. :..||...|..|.
 Worm   339 KETLNAMSIMGLNDEEIGGILRVVSAVMLFGNLEFS------HENKNNDQA-VLLNDAVAQKIAS 396

  Fly   373 LLRVSADDLRRWLLMRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGS 437
            ||.|:..:|.|..|..||:...:.|....|::....:..|:||..|.:||:::|..|||||:...
 Worm   397 LLGVNVTELMRAFLKPKIKVQRDLVHRAQSVDQVNFSVGAIAKASYERLFRWLVHRLNKSLDRTR 461

  Fly   438 KQ-CSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYD 501
            :| .||||:|||.|||.||.|||||.||||.||||||.||..:|..||:|||.||:.|..:||..
 Worm   462 QQSVSFIGILDIAGFEIFETNSFEQLCINYTNEKLQQLFNNTMFVREQQEYLDEGLEWKFLDFGL 526

  Fly   502 N-QPCIDLIESRLGVLDLLDEECRMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTS-FFIKHFSD 564
            | ||.||||:..:|::..||:.|..|:|:|:|:..:|....::.|.:..|...:.| |.:.|::.
 Worm   527 NLQPTIDLIDKPMGIMSTLDDVCLFPQGNDQSFVQRLNNTHSQHPKYVVPEIRSRSDFAVVHYAG 591

  Fly   565 TVEYDVNGFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSAKSST-----LGGRVV 624
            .|:|...|:..||.|.:::.:..||..|..||.  |...::|..:|..||..||     .|.|  
 Worm   592 RVDYQSEGWRVKNMDPLNENVIDVLKTSKESLI--VDMWKDIADVCSLSAADSTSDTGVFGSR-- 652

  Fly   625 ISAGRKQQGNDTRRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWET 689
                            ||.|...:||...::|.||.|:|||:.|.||:||||.||.:|.......
 Worm   653 ----------------VPKKGMFRTVSQLYKEQLARLMSTLNNTNPHFVRCIIPNHEKKHGVLNA 701

  Fly   690 AKIIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMK----LSCRNIVMKW 750
            ..::.|||..||||.:||...|||:|..:.:|..||:      ||...|:.    :..:|.|.:.
 Worm   702 HLVLDQLRCNGVLEGIRICRQGFPTRLPFQEFRQRYE------KLLAPDVNPAGFMDGKNAVYRI 760

  Fly   751 IQ----DEDKYRFGNTQIFFRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRIQKVING 811
            :|    |.:.:|.|.::||||:|.:|..|::|..                       ::..:|..
 Worm   761 VQYLEVDANLFRIGQSKIFFRSGVIAEFEEMRDQ-----------------------KLSALIES 802

  Fly   812 IQKHARGYLARERTQKMREARAGL-ILSKYARGWLCRRRYL------------------------ 851
            .|...||:|.|....:.||....: ||.:....|:..|.:.                        
 Worm   803 FQAQCRGWLGRRVMVRRREQEVAIKILQRNGLAWMRLREWQWWRLLTKVKPLLEVTNKDELIAER 867

  Fly   852 ---------RLRHSISGIQTYARGM--------LARNKFHAMRDHYRAVQIQRFVRGALARRAYQ 899
                     :||.|...|..|.:.|        :.:.:..|.......:..:|      :|.|.:
 Worm   868 EQELKVTAEKLRRSEVFISDYKQQMEKMDEERLVLKTRLDAESSERAEIFEER------SRMAAR 926

  Fly   900 KRRRNIIICQAAIRRFLARRKFKRMKAEAKTISHM------------------------------ 934
            :.....|:.:.:.|..:..:|.|:..:|::.::.|                              
 Worm   927 RDELEGILEEVSKRLEIEEQKAKKADSESRKLTEMVRHLEENLEDEERSRQKLLLEKNSIESRLK 991

  Fly   935 ENKYMGLE-----NKII----SMQQR--------IDELNRDNSNLKHKTS-EISVLKMKLELKK- 980
            |.:..|||     ||:.    ::::|        |||:.|....:|.|.. |.:|.::..||:| 
 Worm   992 ELEAQGLELEDSGNKLSKEKKALEERCEDLSSRLIDEVERSKQLVKAKARLEATVAEINDELEKE 1056

  Fly   981 ------------TLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHAQEEWISQKQ 1033
                        ..|.:.:..:.:|.:|.:..|.|..||..:..|..|:...|    :|.::.:|
 Worm  1057 KQQRHNAETARRAAETQLREEQESCLEKTRKAEELTNQLMRKESELSQISIRN----DEELAARQ 1117

  Fly  1034 TWRQENEELRRQIDEII------------------DMAKNAEVNQRNQED---------RMLAEI 1071
            ...:|..|:|.|:|:.|                  |||:..|..::..|:         ::.|:.
 Worm  1118 QLEREIREIRAQLDDAIEETNKEKAARQKAEKARRDMAEELESYKQELEESNDKTVLHSQLKAKR 1182

  Fly  1072 DN-------------------------------RELNEAYQR-------AIKDKEVIENENFMLK 1098
            |.                               .||||...:       |.|.|...|::|...:
 Worm  1183 DEEYAHLQKQLEETVKSSEEVVEEMKAQNQKKIEELNETIDQLKRQKISADKAKSSAESDNENFR 1247

  Fly  1099 EELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSKNYSYNDSTSLVVKLRS 1163
            .|||.:.:.......::.:..:|..|.|......::.||     ||::|....|:....:.|.:|
 Worm  1248 AELSNIASARLEAEKKRKAAETSLMEKDHKMREMQSNLD-----DLMAKLSKMNNELESIQKAKS 1307

  Fly  1164 ILEEEKQKHKVLQEQY---IKLSSRHKPTEDSFR--------VSELEVE--------------NE 1203
              .:|.....:|::..   ::||...:.:|:..|        :.:||.:              .|
 Worm  1308 --ADETLNSNLLKKNASLDMQLSELTEASEEDRRTRATLNNKIRQLEEDLAVAVEARDDALDAQE 1370

  Fly  1204 KLRSEYDQLRTSIKHGVEINELNAQHAALQEEVRRRREECIQL---KAVLLQQSQSMRSLEPESL 1265
            |:..|..::::.:....:  :|:.::..:.||:|:::|:.:..   :|.:.:|::.......:..
 Worm  1371 KIEKEVKEVKSLLAEARK--KLDEENREVMEELRKKKEKELSAEKERADMAEQARDKAERAKKKA 1433

  Fly  1266 QMRGNDV-NELMEAFHSQKLINRQLESELKAITEEHNSKLV---------EMTQEIER----LNN 1316
            .....|| .||.:...:.:.:.|::....:.:.||.|:.|:         :|.::.|.    |:|
 Worm  1434 IQEAEDVQKELTDVVAATREMERKMRKFDQQLAEERNNTLLAQQERDMAHQMLRDAETKALVLSN 1498

  Fly  1317 EKDELQKVMFESIDEFE--------------------DSNVDTLRQNDRYLRRELQKAVAQFLLV 1361
            |..|.:.:    :|:.|                    ..||..|.:..|.|..||.:|..|.:.:
 Worm  1499 ELSEKKDI----VDQLEKDKRTLKLEIDNLASTKDDAGKNVYELEKTKRRLDEELSRAEQQIIEL 1559

  Fly  1362 QEELKLAN-------AKLKAYRQD-GGQLEHKIEEEMIRNKSNGTSADVGANVTKQKSQNPQGLM 1418
            ::.|:||:       ..::|.|.: ..||..:.|:|..|.|  |.::.: .|:|::.....:...
 Worm  1560 EDALQLADDARSRVEVNMQAMRSEFERQLASREEDEDDRKK--GLTSKI-RNLTEELESEQRARQ 1621

  Fly  1419 KFHSSDLDKILQRLLSALTPRTVVGL--LPGFPAYLIFMCIRYTDLTNADDDVRELLSKFVIQIK 1481
            ...::  .|.::..:|.||.:....|  :......|....:.:.||.....:.|..:...:...:
 Worm  1622 AAIAN--KKKIESQISELTEKNEASLRQIEDLSRQLRKAQLGWKDLQLDVTEARAAMEDALAGQR 1684

  Fly  1482 KMHRTPHPIENRVIWLVNSITLLNLMKQYGDV--DEYVKFNTEKQNQQQLKNFNLFEYRRVILDL 1544
            ...:.....|:.:..|...|..::..|:..:.  ||.:    |:.:..:..:|:..|.||:    
 Worm  1685 DAEKRARASEDEIKRLTADIQAVSSSKRKAEAERDELI----EEVSSLRASSFSNEEKRRL---- 1741

  Fly  1545 IVNLYQALIMQIQGLLDPKIVPAILNNDEIQRGRQ 1579
                 :|.::.::..||.:.....|..:::::.:|
 Worm  1742 -----EAKVIDLEDQLDEEASANELAQEKVRKSQQ 1771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580 276/748 (37%)
MYSc_Myo5 84..767 CDD:276831 265/718 (37%)
IQ 900..922 CDD:197470 3/21 (14%)
GBP_C <971..1086 CDD:303769 34/192 (18%)
coiled coil 1049..1068 CDD:293879 6/45 (13%)
coiled coil 1077..1086 CDD:293879 3/15 (20%)
JAKMIP_CC3 <1190..1299 CDD:292653 19/134 (14%)
Myo5_CBD 1424..1792 CDD:271254 25/160 (16%)
nmy-2NP_492186.3 MYSc 81..793 CDD:214580 276/749 (37%)
MYSc_class_II 100..781 CDD:276951 265/718 (37%)
Myosin_tail_1 858..1934 CDD:279860 165/955 (17%)
ATP-synt_B <1104..1195 CDD:304375 17/94 (18%)
CDC37_N <1317..1396 CDD:296150 11/80 (14%)
Orbi_VP5 1599..>1865 CDD:279272 29/191 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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