DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and spe-15

DIOPT Version :10

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_490856.1 Gene:spe-15 / 171712 WormBaseID:WBGene00004969 Length:1219 Species:Caenorhabditis elegans


Alignment Length:1335 Identity:387/1335 - (28%)
Similarity:606/1335 - (45%) Gaps:310/1335 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMP-LYGPSIIRAYRGHAMGDLE 137
            |...|.:|:|..:|:|.|:|:...: ||||...||::||||..:. ||.|..|:.|||.::|.:|
 Worm    68 DNCALVHLNEATLLNNCRLRYANGK-IYTYVANILISINPYQLIDGLYSPETIKEYRGKSLGQME 131

  Fly   138 PHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVERKVLASSP 202
            |||||:|::||.::.|...:.|||||||||||||.|.|..::|.....|::: ..:::::|.::|
 Worm   132 PHIFAIADKAYREMRRIKTSQSIIVSGESGAGKTESQKAVLKYLCENWGTDA-GPIQQRLLETNP 195

  Fly   203 IMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNYHIFY 267
            |:||||||||.||:||||||||.::.|.:...|   .|..:..||||.|||..||.|||||||||
 Worm   196 ILEAFGNAKTLRNNNSSRFGKFVQIHFSDNGTV---AGGFVSHYLLETSRVCRQAAGERNYHIFY 257

  Fly   268 QLCAARSK--YPELVLDHQDKFQFLNMGGA-----------PEIER------------VSDAEQF 307
            ||.|..|.  |.:|.|.....|.:|..|..           .:..|            :||.:.|
 Worm   258 QLIAGSSPDLYKKLRLAPASSFNYLKHGATLFFVNSKSSLKTDASRFSETNSSVSDSIISDIDDF 322

  Fly   308 NETVQAMTVLGFSIQQIADIVKILAGILHLGNIQVSKKFNEGSEEEDSDS---CDIFH-NDIHLQ 368
            .:..:|:.:.|.|..:...|...:|||||||||:.        ||..|||   |.|.. .:..|.
 Worm   323 AKLERALALSGVSDDEKMFIWSTVAGILHLGNIEF--------EENASDSRGGCMITSGTENSLM 379

  Fly   369 ITADLLRVSADDLRRWLLMRKIESV-----NEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGV 428
            ..|:||.:..::::..|..|.:::.     ...:.:|.....|.|.||||||.||:|||.::|..
 Worm   380 AAAELLGLEPEEMKLGLCARIMQTTKGGVKGTLIRVPLKAHEASAGRDALAKAIYSKLFDWLVAQ 444

  Fly   429 LNKSLNNGSKQCSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIT 493
            :|||: ...|...:|||||:.|||.|.||||||||||:.|||||..||:.:.|.|||.|..||:.
 Worm   445 INKSI-PFEKSTGYIGVLDVAGFEYFAVNSFEQFCINFCNEKLQHFFNERILKQEQEMYEAEGLN 508

  Fly   494 WTMIDFYDNQPCIDLIESRL-GVLDLLDEECRMPKGSDESWAGKLIGKCNKFPHF--EKPRFGTT 555
            ...|:|.||..||:|.|.:. |:.||||||.::|:.:.:.:..: ..:.|| .||  :.||....
 Worm   509 IQKIEFTDNLDCIELFEKKASGLFDLLDEEAKLPRATFQHFTQR-AHESNK-NHFRLDAPRKSKV 571

  Fly   556 ----------SFFIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLC 610
                      ...|:|::.||.|:...|:|||.|.:...|..::.:|:..|...:.|.|     .
 Worm   572 KSHREMRDDEGLLIRHYAGTVCYETRYFVEKNNDQLHNSLEMLIEQSSFPLVVSLFTSE-----A 631

  Fly   611 VDSAKSSTLGGRVVISAGRKQQGNDTRRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRC 675
            ..:.|:   |||:               :.|       :||::|:..|:||:..|:.|..|:|||
 Worm   632 TGAVKT---GGRL---------------KAV-------SVGAKFKSQLSSLLDKLNNTGTHFVRC 671

  Fly   676 IKPNDDKVAFKWETAKIIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKNDMK 740
            :|||....|:.::.:.|:.||:..|:...:|:...|||||..:.|.|..|:..:..| |.:.|.:
 Worm   672 VKPNSQMKAWHFDGSAILGQLQCAGMASVLRLMQEGFPSRTSFADLYAMYEKNLPPS-LARLDPR 735

  Fly   741 LSCRNIVMKWIQDEDKYRFGNTQIFFRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQFLRI 805
            |..:.:......|::.::||||::||.||:.|..:|:   :::...|:::             .|
 Worm   736 LFSKCLFHALGLDQNDFQFGNTKVFFTAGKFAEFDQM---MKQDPETVME-------------LI 784

  Fly   806 QKVINGIQKHARGYLARERTQKMREARAGLILSKYARGWLCRRRYLRLRHSISGIQTYARGMLAR 870
            .||.:        :|.:.|.:|::.....:|..|        .:.|.....|..||.:.||.|.|
 Worm   785 SKVTD--------WLVKARWRKVQYGAWSVIKLK--------NKILYRAEKIKKIQAWIRGYLVR 833

  Fly   871 NKFHAMRDHYRAVQIQRFVRGALARRA---YQKRRRNIIICQAAIRRFLARRKFKRMKAEAKTIS 932
            .:||.              |.|:.|:|   .:..|....|    :.|.....:.|..:|...|..
 Worm   834 KRFHK--------------RLAIFRKACALLENSREMTDI----LARMNESSQDKWREAADSTTG 880

  Fly   933 HMENKYMGLENKIISMQQRIDELNRD--------NSNLKHKTSEISVLKMKLELKKTLEAEFKNV 989
            .::.....::|         |:||.:        ...:|...|.|:.||::||            
 Worm   881 ELDELVKTIKN---------DDLNTEIDRAVKCYEDCVKRVDSIIADLKLQLE------------ 924

  Fly   990 KAACQDKDKLIEALNKQLEAERDEKMQLLEENGHAQEEWISQKQTWRQENEELRRQIDEIIDMA- 1053
                  .|:|.|....:.||| |::.:..||...|::|.|            |||:::|..:.| 
 Worm   925 ------NDELAEVERARKEAE-DKERREAEEKAAAEQEKI------------LRRKMEEEREKAQ 970

  Fly  1054 KNAEVNQRNQEDRMLAEIDNRELNEAYQRAIKDKEVIENENFMLKEELSRLTAG---------SF 1109
            |..|:....|:.::.||.:               |.::..|   |||..||.|.         ..
 Worm   971 KEYELQLEMQKQKLAAEAE---------------EEVKRRN---KEERDRLDAAVSSRLASSDGV 1017

  Fly  1110 SLHARKASNA--SSQNEDDVG---YASAKNTLDINRPPDLLSKNYSYNDSTSLVV-------KLR 1162
            :|.|::||.|  ..|::.|:|   ||..::.::.:            ||...||.       :||
 Worm  1018 ALVAQEASAAPPKQQSKYDLGNWKYADLRDAINTS------------NDMELLVACKEEFHRRLR 1070

  Fly  1163 SILEEEKQKHKVLQE-----QYIKLSSRHKPTEDSFRVSELEVENEKLRSEYDQLRTSIKHGVEI 1222
             |..|.|.|:...::     ..:.:.::.||:..|..||.::.                      
 Worm  1071 -IYNEWKSKNSANRDVPPTRAPLTVYNQQKPSSSSMMVSRVQA---------------------- 1112

  Fly  1223 NELNAQHAALQEEVRRRREECIQLKAVLLQQSQSMRSLEPESLQMRGNDVNELMEAFHSQKLINR 1287
                |.|                |...|.||.....|...::.:..|...:.:..|..:.:.|.|
 Worm  1113 ----APH----------------LNPALTQQRYFKVSFATDNKKKNGGSQSGMWYAHFNGQYIRR 1157

  Fly  1288 QLESELKAITEEHNSKLVEMTQEIERLNNEKDELQ 1322
            ||              .:..:|:.:.|...||:||
 Worm  1158 QL--------------TIRPSQKPQLLVAGKDDLQ 1178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc_Myo5 84..767 CDD:276831 264/730 (36%)
IQ 900..922 CDD:197470 3/21 (14%)
SMC_prok_B <942..1365 CDD:274008 85/416 (20%)
Myo5_CBD 1424..1792 CDD:271254
spe-15NP_490856.1 Myosin_N 10..55 CDD:460670
MYSc_Myo6 78..761 CDD:276833 263/729 (36%)
CBD_MYO6-like 773..923 CDD:409646 38/205 (19%)
MAP7 <924..1000 CDD:461709 27/124 (22%)
MyUb_Myo6 1033..1073 CDD:439319 11/52 (21%)
Myosin-VI_CBD 1123..1211 CDD:465157 14/70 (20%)
Blue background indicates that the domain is not in the aligned region.

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