DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and CG43796

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:NP_001260254.1 Gene:CG43796 / 14462726 FlyBaseID:FBgn0264340 Length:127 Species:Drosophila melanogaster


Alignment Length:85 Identity:24/85 - (28%)
Similarity:34/85 - (40%) Gaps:22/85 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1052 MAKNAEVNQR------------NQEDRMLAEIDNREL-NEAYQRAIKDKEVIENENFMLKEELSR 1103
            :||||||::|            |.:...|..|||..| .:.|:...:|.     .|.:.|.|..|
  Fly     4 VAKNAEVHRRGILGFAPRIGLVNVDYDDLDRIDNFYLETQRYRDYYRDP-----HNILHKPERFR 63

  Fly  1104 LTAGSFSLHARKASNASSQN 1123
            ...|..|:..    :.|.||
  Fly    64 QHQGKCSIKL----DTSVQN 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580
MYSc_Myo5 84..767 CDD:276831
IQ 900..922 CDD:197470
GBP_C <971..1086 CDD:303769 14/46 (30%)
coiled coil 1049..1068 CDD:293879 8/27 (30%)
coiled coil 1077..1086 CDD:293879 1/8 (13%)
JAKMIP_CC3 <1190..1299 CDD:292653
Myo5_CBD 1424..1792 CDD:271254
CG43796NP_001260254.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0160
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.