DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and myo5b

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:XP_031750785.1 Gene:myo5b / 100379760 XenbaseID:XB-GENE-988439 Length:1835 Species:Xenopus tropicalis


Alignment Length:1904 Identity:741/1904 - (38%)
Similarity:1107/1904 - (58%) Gaps:184/1904 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LYAQGAKIWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKE---VKLKADGSDLPPLRNPAI 68
            ||:|..::|:|..:.||.||.:.:.|::|...|::     ||::   ::.:.|.::||.||||.|
 Frog     6 LYSQYTRVWIPDPEDVWRSAEIIKDYKEGDKSLQL-----KLEDESVIQHRVDPNNLPHLRNPDI 65

  Fly    69 LVGQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSIIRAYRGHAM 133
            |||:||||.|||||||.|||||:|||.|...|||||||:|||||||.::|:||..:|.||.|..|
 Frog    66 LVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYQQLPVYGEDVIYAYSGQNM 130

  Fly   134 GDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYFAAVGGSESETQVERKVL 198
            ||::|||||:|||||.::.|:..|.||||||||||||||||||||||||.||||.||..||.|||
 Frog   131 GDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGSASEANVEEKVL 195

  Fly   199 ASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYLLEKSRVVYQAQGERNY 263
            ||||||||.||||||||||||||||:.::.|..:..::   ||.|.||||||||||:||..||||
 Frog   196 ASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHII---GANMRTYLLEKSRVVFQADMERNY 257

  Fly   264 HIFYQLCAARS--KYPELVLDHQDKFQFLNMGGAPEIERVSDAEQFNETVQAMTVLGFSIQQIAD 326
            ||||||||:.|  ::.||.|...::|.:.|.||.|.|:.|.|||.|.:|.||.|:||........
 Frog   258 HIFYQLCASASLPEFSELSLAEAEEFFYTNQGGDPVIDGVDDAEDFEKTRQAFTLLGVKETHQMG 322

  Fly   327 IVKILAGILHLGNIQVSKKFNEGSEEEDSDSCDIFHNDIHLQITADLLRVSADDLRRWLLMRKIE 391
            |.||:|.||||||:.:       ..|.:.:||::...|.||.....||.:..|.::.||..||:.
 Frog   323 IFKIVASILHLGNVAI-------QTEREGESCNLSKGDKHLTHFCSLLGLEQDQMQHWLCHRKLV 380

  Fly   392 SVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNKSLNNGSKQCSFIGVLDIYGFETFEV 456
            :.:|..:...|.|.|..||:||||||||:||.:||..:||:|:...||.|||||||||||||||:
 Frog   381 TTSETYVKTMSAEQAVNARNALAKHIYAQLFNWIVQHVNKALHTTIKQHSFIGVLDIYGFETFEI 445

  Fly   457 NSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTMIDFYDNQPCIDLIESRLGVLDLLDE 521
            ||||||||||||||||||||.||||||||||:||.|.||:||||||||||||||::||:||||||
 Frog   446 NSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDE 510

  Fly   522 ECRMPKGSDESWAGKLIGKCNKFPHFEKPRFGTTSFFIKHFSDTVEYDVNGFLEKNRDTVSKELT 586
            ||::|||:|::||.||..:.....||:|||....:|.:.||:|.|||..:||||||||||.:|..
 Frog   511 ECKVPKGTDQNWAQKLYDRHGSSQHFKKPRMSNVAFIVVHFADQVEYQCDGFLEKNRDTVYEEQI 575

  Fly   587 QVLSESNMSLAKQVMTLEEIDTLCVDSAKSSTLGGRVVISAGRKQQGNDTRRRVVP-----SKQH 646
            .:|..|...|...:...|: ||:      ..|..|:..||.          |...|     :|:|
 Frog   576 NILKASKYPLVADLFQNEK-DTV------PPTPTGKSKISV----------RPAKPALKSANKEH 623

  Fly   647 RKTVGSQFQESLASLISTLHATTPHYVRCIKPNDDKVAFKWETAKIIQQLRACGVLETVRISAAG 711
            :||||.||:.||..|:.||:||||||||||||||.|.:|.::..:.:|||||||||||:||||||
 Frog   624 KKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDYKESFSFDPKRAVQQLRACGVLETIRISAAG 688

  Fly   712 FPSRWLYPDFYMRYQLLVYRSKLDKNDMKLSCRNIVMKWIQDEDKYRFGNTQIFFRAGQVAFLEQ 776
            :||||.|.||:.||::|:.:..:...|.|:.|:|::...|:|.||::||.|:|||||||||:||:
 Frog   689 YPSRWTYHDFFNRYRVLMKKKDISLGDKKVICKNVLENLIKDPDKFQFGRTKIFFRAGQVAYLEK 753

  Fly   777 VRANLRKKYITIVQSVVRRFVYRRQFLRIQKVINGIQKHARGYLARERTQKMREARAGLILSKYA 841
            :||:..:....::|..||.::.|.::.|::|....||::.||:|||.....:|..:|.:...|..
 Frog   754 LRADKFRAATIMIQKTVRGWLQRVKYRRMKKAAVTIQRYTRGHLARRLALHLRMTKAAITFQKQF 818

  Fly   842 RGWLCRRRYLRLRHSISGIQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALARRAYQKRRRNII 906
            |.....|.:.:.|.:...||:|.|||..|..:..:.:.::|..||:..||..||:.:.|.|...:
 Frog   819 RMIRVYRGFQKTRKAAVTIQSYTRGMFVRRAYRQLLEQHKAAIIQKHWRGWRARKLFSKFRSAAV 883

  Fly   907 ICQAAIRRFLARRKFKRMKAEAKTISHMENKYMGLENKIISMQQRIDELNRDNSNLKHK------ 965
            :.|...||..|||:.|::|.||:|..|.:...:|:|||::.:|:::||.|::..:||.:      
 Frog   884 VIQCYFRRMKARRELKQLKIEARTAEHFKKLSVGMENKVVQLQRKLDEQNKEQKDLKEQLVSATS 948

  Fly   966 TSEISVLKMKLELKKTLEAEFKNVKAACQDKDKLIEALNKQLEAERDEKMQLLEENGHAQEEWIS 1030
            |..:.|.|::.||:|..:|:        ||:::| .:|.::|||.|:|..:...|....::..::
 Frog   949 THAVEVEKLQKELEKQRQAQ--------QDENQL-TSLQQELEALREELAKAYSEKKVVEDTLMN 1004

  Fly  1031 QKQTWRQ-------ENEELRRQIDEI---IDMAKNAEVNQRNQEDRMLAEIDNRELNEAYQRAIK 1085
            :|:...|       ||..|:.:.:|:   |.:....|..|...::.:..:.|..|....:|..:|
 Frog  1005 EKEQLLQRVSELEEENTNLKEEKEELSNKIILRSEDEFTQSTIKENLEIKKDLEEERSRHQNLVK 1069

  Fly  1086 DKEVIENENFMLKEELSRLTAGSFSLHARKASNASSQNEDDVGYASAKNTLDINRPPDLLSK--- 1147
            :...:|.....||||:: :.......|.|..||.||. |.|..|.|. :|.:|....|.:.:   
 Frog  1070 EYTRLEQRYDNLKEEVN-IIKQQMPGHRRNPSNQSSL-ESDSNYPSI-STSEIGDTEDTIKEVEE 1131

  Fly  1148 ---NYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRH----------------KPTE--- 1190
               ..:..| .||.:||:..:.|.:.:.|.||.|..|...:.                :.|:   
 Frog  1132 AGLEKAAMD-MSLFLKLQKRVRELELERKKLQSQLDKKEQQENKKSQVIDTTNEVIADRDTDIAY 1195

  Fly  1191 DSFRVSELEVENEKLRSEYDQLRTSIKHG------------VEINELNAQHAALQEEVRRRREEC 1243
            ::.:..|||.||:||:::.:::|.:|..|            :.:|:|.:.|    ||:..|:||.
 Frog  1196 NNLKRQELESENKKLKNDLNEMRKTIADGAVDGSSEEARIAMLLNQLKSAH----EELDVRKEEV 1256

  Fly  1244 IQLKAVLL---QQSQSMRSLEPESLQMRGN---DVNELMEAFH---------------------- 1280
            :.|:..::   ||.:|.|.:..|:.....|   |.::.:||:|                      
 Frog  1257 LMLRTQIVKAAQQKESERIMSSEASWPNSNKEMDEDDAIEAYHGVCETNRKTQDWGYLNEDGELG 1321

  Fly  1281 ----SQKLINRQLESELKAITEEHNSKLVEMTQEIERLNNEKDELQKVMFESIDEFEDSNVD--- 1338
                ..|.:.|.||::|:|.:.:|:.::..:|..|:.|..|.::.|:|:.:::....::.|:   
 Frog  1322 LAYQGLKQVARLLEAQLQAQSRQHDEEVEILTSHIDSLKEELEKQQQVLLQALQLSPEAQVEFGL 1386

  Fly  1339 -----TLRQNDRYLRRELQKAVAQFLLVQEELKLANAKLKAYRQDGGQLEHKIEEEMIRNKSNGT 1398
                 .|...:..|:..|:|:       ::..|....:||.|.:.|...|..::.|        .
 Frog  1387 QHEITRLTNENLDLKELLEKS-------EKNEKKLKKQLKTYMKKGQDSEDVVQTE--------R 1436

  Fly  1399 SADVGANVTKQKSQNP-QGLMKFHSSDLDKILQRLLSALTPRTVVGLLPGFPAYLIFMCIRYTDL 1462
            ..::...||.|:.:.. ||:::::..:...:::.|:..:.|..:..::|..|||::|||||:.|.
 Frog  1437 KPELTRQVTVQRIEKDFQGMLEYYKEEEPLLVRNLIIDVKPEQMSSMVPCLPAYILFMCIRHADY 1501

  Fly  1463 TNADDDVRELLSKFVIQIKKMHRTPH-PIENRVIWLVNSITLLNLMKQYGDVDEYVKFNTEKQNQ 1526
            .|.|..|..||:..:..|||:.:..| ..:....||.||..||:.:|||...:.::..|:.|||:
 Frog  1502 INDDQKVHSLLTSTINGIKKVLKKHHSEFQITSFWLSNSSRLLHCLKQYSGDEGFMTSNSPKQNE 1566

  Fly  1527 QQLKNFNLFEYRRVILDLIVNLYQALIMQIQGLLDPKIVPAILNNDEIQ--RGRQAHGMRSRATS 1589
            ..|:||:|.|||:|:.||.:.:||.:|...:..:.|.||.|:|..:.||  .|.:..|.|.|   
 Frog  1567 HCLRNFDLTEYRQVLSDLSIQIYQQMIKIAETHMQPMIVSAMLETESIQGLSGVKQTGYRKR--- 1628

  Fly  1590 IGASSSPEHGGGPAWKQLIGQLEHFYKQFQHFGLDNCYAEQIFHQLLYFICAVALNCLMLRGDIC 1654
              .||..:.....:.:.:|.||..|.......|||....:|:|.||.|.|.||.||.|:||.|:|
 Frog  1629 --TSSMADGDNSYSLEAVIRQLNTFNSIMCDHGLDPEIIQQVFKQLFYMINAVTLNNLLLRKDVC 1691

  Fly  1655 MWETGMIIRYNIGCIEDWVRSKKM-SNDVLTALAPLNQVSQLLQ-SRKSEQDVQTICDLCTSLST 1717
            .|.|||.:||||..:|:|:|.|.: .:.....:.||.|.:|||| .:|:|:|.:.||.|||:|:|
 Frog  1692 SWSTGMQLRYNISQLEEWLRGKNLHPSGAAQTMEPLIQAAQLLQLKKKTEEDAEAICSLCTALTT 1756

  Fly  1718 AQVLKVMKSY-KLDDYESEITNVFLEKLTEKLNARQMQKSNSDEFTIDQKFIQPFKVVFRYSDIK 1781
            .|::|::..| .::::|..:|..|:    ..:.|:..::::..:..:|.|::.|....|..|.|.
 Frog  1757 QQIVKILNLYTPVNEFEERVTVSFI----RIIQAQLQERNDPPQLLMDSKYMFPVLFPFSPSAIT 1817

  Fly  1782 LEDIELPSHLNLDEFLTKI 1800
            |:.|::|..|.|| ||.|:
 Frog  1818 LDTIQIPPSLKLD-FLMKV 1835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580 411/719 (57%)
MYSc_Myo5 84..767 CDD:276831 386/689 (56%)
IQ 900..922 CDD:197470 8/21 (38%)
GBP_C <971..1086 CDD:303769 28/124 (23%)
coiled coil 1049..1068 CDD:293879 3/21 (14%)
coiled coil 1077..1086 CDD:293879 1/8 (13%)
JAKMIP_CC3 <1190..1299 CDD:292653 35/155 (23%)
Myo5_CBD 1424..1792 CDD:271254 127/373 (34%)
myo5bXP_031750785.1 MYSc_Myo5 81..744 CDD:276831 386/689 (56%)
IQ 758..780 CDD:197470 4/21 (19%)
IQ 781..800 CDD:197470 8/18 (44%)
IQ 855..875 CDD:197470 7/19 (37%)
Smc 895..>1217 CDD:224117 85/334 (25%)
Smc 1123..>1458 CDD:224117 72/354 (20%)
Myo5b_CBD 1461..1832 CDD:271261 130/380 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 768 1.000 Domainoid score I87
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1240 1.000 Inparanoid score I178
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D311886at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - otm48256
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X244
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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