DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment didum and myh6

DIOPT Version :9

Sequence 1:NP_724569.1 Gene:didum / 35680 FlyBaseID:FBgn0261397 Length:1800 Species:Drosophila melanogaster
Sequence 2:XP_002939062.2 Gene:myh6 / 100216059 XenbaseID:XB-GENE-968718 Length:1937 Species:Xenopus tropicalis


Alignment Length:1955 Identity:513/1955 - (26%)
Similarity:874/1955 - (44%) Gaps:452/1955 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSEEMLYAQ------GAKIWVPHADLVWESATLEESYRKGAGFLKICTDSGKLKEVKLKADGSDL 60
            |.:|.|.||      ..:.:||.....:..|.:..  |:| |.:...|..||...||    .||:
 Frog    19 SDKERLEAQTRVFDIKTECFVPEPQQEYVKAKIIS--REG-GKVTAETQDGKTITVK----DSDV 76

  Fly    61 PPLRNPAILVGQNDLTTLSYLHEPGVLHNLRVRFCERQIIYTYCGIILVAINPYAEMPLYGPSII 125
            .. :||.......|:..|::||||.||:||:.|:. ..:||||.|:..|.:|||..:|:|...::
 Frog    77 HQ-QNPPKFDKIEDMAMLTFLHEPAVLYNLKERYA-AWMIYTYSGLFCVTVNPYKWLPVYNSEVV 139

  Fly   126 RAYRGHAMGDLEPHIFALAEEAYTKLERENCNLSIIVSGESGAGKTVSAKYAMRYF---AAVGGS 187
            .||||....:..||||::::.||..:..:..|.||:::|||||||||:.|..::||   |:|||.
 Frog   140 TAYRGKKRSEAPPHIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFASIASVGGK 204

  Fly   188 ESETQ-----VERKVLASSPIMEAFGNAKTTRNDNSSRFGKFTKLLFRNQMGVMFLQGATMHTYL 247
            :.:..     :|.:::.::|.:||||||||.|||||||||||.::.| ...|.  |..|.:.|||
 Frog   205 KEQANANKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHF-GASGK--LASADIETYL 266

  Fly   248 LEKSRVVYQAQGERNYHIFYQLCAARSKYPE-----LVLDHQDKFQFLNMGGAPEIERVSDAEQF 307
            ||||||::|.:.||:||||||:.:  :|.||     ||.::...:.:::.|.. .:..:.|:::.
 Frog   267 LEKSRVIFQLKSERDYHIFYQILS--NKKPELLDMLLVTNNPYDYSYISQGEV-TVASIDDSDEL 328

  Fly   308 NETVQAMTVLGFSIQQIADIVKILAGILHLGNIQVSKKFNE------GSEEEDSDSCDIFHNDIH 366
            ..|..|..||||:..:...:.|:...|:|.||::..:|..|      |:||.|.           
 Frog   329 MATDNAFDVLGFTADEKVGVYKLTGAIMHSGNMRFKQKQREEQAEPDGTEEADK----------- 382

  Fly   367 LQITADLLRVSADDLRRWLLMRKIESVNEYVLIPNSIEAAQAARDALAKHIYAKLFQYIVGVLNK 431
               .|.|:.:::.||.:.|...:::..||||....:::....:..||||.:|.|:|.::|..:|.
 Frog   383 ---AAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVNYSIGALAKSVYEKMFLWMVVRINA 444

  Fly   432 SLNNGSKQCSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGITWTM 496
            :|.....:..|||||||.|||.|:.|||||.|||:.||||||.||.|:|.||||||.||||.|..
 Frog   445 TLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEF 509

  Fly   497 IDF-YDNQPCIDLIESRLGVLDLLDEECRMPKGSDESWAGKL----IGKCNKFPHFEKPR----F 552
            ||| .|.|.||||||..:|::.:|:|||..||.||.::..||    :||.|   :|:|||    .
 Frog   510 IDFGMDLQACIDLIEKPMGIMSILEEECMFPKASDTTFKAKLYDNHLGKSN---NFQKPRNIKGK 571

  Fly   553 GTTSFFIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESNMSLAKQVMTLEEIDTLCVDSA-KS 616
            ....|.:.|::.||:|:::|:||||:|.:::.:..:..:|::.|         :..|..:.| ..
 Frog   572 PEAHFALVHYAGTVDYNISGWLEKNKDPLNETVVGLYQKSSLKL---------LAVLFANYAGAD 627

  Fly   617 STLGGRVVISAGRKQQGNDTRRRVVPSKQHRKTVGSQFQESLASLISTLHATTPHYVRCIKPNDD 681
            |..||:   ..|.|::|:..           :||.:..:|:|..|::.|..|.||:||||.||:.
 Frog   628 SDTGGK---GKGAKKKGSSF-----------QTVSALHRENLNKLMTNLRTTHPHFVRCIIPNER 678

  Fly   682 KVAFKWETAKIIQQLRACGVLETVRISAAGFPSRWLYPDFYMRYQLLVYRSKLDKN--------- 737
            |...:.:...::.|||..||||.:||...|||:|.||.||..||::|        |         
 Frog   679 KAPGEMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRIL--------NPAAIPEGQF 735

  Fly   738 -DMKLSCRNIVMKWIQDEDKYRFGNTQIFFRAGQVAFLEQVRANLRKKYITIVQSVVRRFVYRRQ 801
             |.:.....::.....|..:|:||:|::||:||.:..||::|..                     
 Frog   736 IDSRKGSEKLLGSLDIDHTQYKFGHTKVFFKAGLLGLLEEMRDE--------------------- 779

  Fly   802 FLRIQKVINGIQKHARGYLARERTQKMREARAGLILSKY-------ARGWLCRRRYLRLRHSISG 859
              |:.::|..||..:||.|.|...:|:.|.|..|::.::       .:.|...:.|.:::..:..
 Frog   780 --RLSRIITRIQAQSRGLLMRREFKKILERRDALLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKT 842

  Fly   860 IQTYARGMLARNKFHAMRDHYRAVQIQRFVRGALARRAYQKRRRNIIICQAAIRRFLARRKFKRM 924
            .:|                                    :|...|:            :.:|:|:
 Frog   843 AET------------------------------------EKEMANM------------KEEFQRL 859

  Fly   925 KAEAKTISHMENKYMGLENKIISMQQRIDELNRDNSNLKHKTSEISVLKMKLELKKTLEAEFKNV 989
            |   :.:...|.:...||.|::|:                       |:.|.:|:..::||..|:
 Frog   860 K---EALEKSETRRKELEEKMVSL-----------------------LQEKNDLQLQVQAESDNL 898

  Fly   990 KAACQDKDKLIEALNK-QLEAERDEKMQLLEENGHAQEEWISQKQTWRQENEELRRQIDEI---- 1049
            ..|.:..::||:  || ||||:..|:.:.||:......|..::|:....|..||::.||::    
 Frog   899 NDAEERCEQLIK--NKIQLEAKLKEQTERLEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTL 961

  Fly  1050 --IDMAKNAEVNQ-RNQEDRM--LAEI------DNRELNEAYQRAIKDKEVIENENFMLKEELSR 1103
              ::..|:|..|: :|..:.|  |.||      :.:.|.||:|:.:.|.:..|       ::::.
 Frog   962 AKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQTLDDLQAEE-------DKVNS 1019

  Fly  1104 LTAGSFSLHARKASNASSQNEDDVGYA---SAKNTLDINRPPDLLSKNYSYNDSTSLVVKL---R 1162
            ||         ||.:...|..||:..:   ..|..:|:.|....|..:.......  |:.|   :
 Frog  1020 LT---------KAKSKLEQQVDDLEGSLEQEKKLRMDMERAKRKLEGDLKLTQEN--VMDLENDK 1073

  Fly  1163 SILEEEKQK---------HKVLQEQYIKLSSRHKPTEDSFRVSELEVENE---KLRSEYDQLRTS 1215
            ..|||:.:|         .|:..||.:.:..:.|..|...|:.|||.|.|   ..|::.::||:.
 Frog  1074 QQLEEKAKKKEFEISQLNSKIEDEQMMGMQLQKKMKEHQARIEELEEELEAERTARAKVEKLRSD 1138

  Fly  1216 IKHGVEINELNAQ------HAALQEEVRRRRE-ECIQLKAVLLQQSQSMRSLEPESLQMRGNDVN 1273
            :..  |:.|::.:      ..::|.|:.::|| |.::|:          |.||..:||.      
 Frog  1139 LSR--ELEEISERLEEAGGATSVQMELNKKREAEFLKLR----------RDLEESTLQS------ 1185

  Fly  1274 ELMEAFHSQKLINRQLESELKAITEEHNSKLVEMTQEIERLNNEKDELQKVMFESIDEFED--SN 1336
                            |:...|:.::|...:.|::::|:.|...|.:|:|...|...|.:|  ||
 Frog  1186 ----------------EATAAALRKKHADSVAELSEQIDNLQRVKQKLEKEKSEFKLELDDVASN 1234

  Fly  1337 VD-------TLRQNDRYLRRELQKAVAQFLLVQEELKLANAKLKAYRQDGGQLEHKIEE------ 1388
            ::       .|.:..|.|..::.:..:::...|..|...:::....:.:.|:|..:::|      
 Frog  1235 MEQIVKSKANLEKMCRTLEDQMNENRSKYEEAQRTLNDISSQKAKLQTENGELNRRLDEKEALVS 1299

  Fly  1389 EMIRNKSNGTS--ADVGANV---TKQKSQNPQGLMKF-HSSDL-----------DKILQRLLSAL 1436
            :|.|.|...:.  .|:...:   :|.|:....||... |..||           ...|||:||..
 Frog  1300 QMTRGKQTYSQQLEDLKRQLEEESKAKNALAHGLQSARHDCDLLREQYEEEQEAKAELQRILSKA 1364

  Fly  1437 TP-----RTVVGLLPGFPAYLIFMCIRY-TDLTNADDDVRELLSKFVIQIKK------------- 1482
            ..     ||                 :| ||.....:::.|...|...::::             
 Frog  1365 NAEVAQWRT-----------------KYETDAIQRTEELEEAKKKLAQRLQEAEEAVEAVNAKCS 1412

  Fly  1483 -MHRTPHPIENRVIWLVNSITLLN-----LMKQYGDVDEYV-----KF---NTEKQNQQQ----- 1528
             :.:|.|.::|.:..|:..:...|     |.|:..:.|:.:     ||   .||.::.|:     
 Frog  1413 SLEKTKHRLQNEIEDLMVDLERSNAAAAALDKKQRNFDKVLAEWKQKFEESQTELESSQKDARSL 1477

  Fly  1529 ----LKNFNLFEYRRVILDLIVNLYQALIMQIQGLLDP-----KIVPAILNNDEIQRGRQAHGMR 1584
                .|..|.:|.....|:......:.|..:|..|.:.     |.:..:   ::|::..:...|.
 Frog  1478 STELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKSIHEL---EKIRKQLEQEKME 1539

  Fly  1585 SRATSIGASSSPEHGGGPAWKQLIGQLEHFYKQFQHFGLDNCYA------EQIFHQLLYFICAVA 1643
            .:.....|.:|.||..|   |.|..|||  :.|.:. .:|...|      ||:.......:.|:.
 Frog  1540 LQTALEEAEASLEHEEG---KILRAQLE--FNQLKS-EIDRKLAEKDEEMEQVKRNNQRLVDALQ 1598

  Fly  1644 LNCLMLRGDICMWETGMIIRYNIGCIEDWVRSKKMSNDVLTALAPLNQVS-QLLQSRKSEQDVQ- 1706
               ..|..:|......:.::            |||..|       ||::. ||.|:.:|..:.. 
 Frog  1599 ---TQLEAEIRSRNEALRVK------------KKMEGD-------LNEMEIQLSQANRSASEAHK 1641

  Fly  1707 -------TICDLCTSLSTAQVLKVMKSYKLDDYESEITNVFLEKLTEKLNARQMQKSNSDEFTID 1764
                   ::.|  |.:.....::.....|.:....|..|:.|:...|:|.:...|...|.:.. :
 Frog  1642 HLKAAHGSLKD--TQMQLDDTMRANDDLKENTAIVERRNMLLQAELEELRSILEQTERSRKLA-E 1703

  Fly  1765 QKFIQ 1769
            |:.|:
 Frog  1704 QELIE 1708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
didumNP_724569.1 MYSc 65..778 CDD:214580 278/751 (37%)
MYSc_Myo5 84..767 CDD:276831 266/721 (37%)
IQ 900..922 CDD:197470 2/21 (10%)
GBP_C <971..1086 CDD:303769 37/130 (28%)
coiled coil 1049..1068 CDD:293879 5/27 (19%)
coiled coil 1077..1086 CDD:293879 3/8 (38%)
JAKMIP_CC3 <1190..1299 CDD:292653 25/118 (21%)
Myo5_CBD 1424..1792 CDD:271254 77/419 (18%)
myh6XP_002939062.2 Myosin_N 34..72 CDD:397036 9/40 (23%)
MYSc_class_II 99..766 CDD:276951 266/721 (37%)
Myosin_tail_1 846..1923 CDD:396244 201/1006 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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