DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and yifB

DIOPT Version :10

Sequence 1:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_418214.2 Gene:yifB / 948282 ECOCYCID:EG11260 Length:506 Species:Escherichia coli


Alignment Length:478 Identity:99/478 - (20%)
Similarity:173/478 - (36%) Gaps:130/478 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 TTVEVDRGRINQPTLCTNCNTNHCFRLIHNRSEFTDKQLVKLQESPDDMAAGQTPHNV-----LL 375
            |||:..|.|:..             .:|::..|:..|: :.:..:|.|:......:::     ||
E. coli    40 TTVKEARDRVRS-------------AIINSGYEYPAKK-ITINLAPADLPKEGGRYDLPIAIALL 90

  Fly   376 YAHNDL----VDKVQPGDRVTVTGIYRATPLKTGGLSSSVKSVYKTHVDVVHFRKVDNKRLYEDE 436
            .|...|    :|:.:....:.:||..|..|   |.:||:.:::...       ||:...:..|||
E. coli    91 AASEQLTANKLDEYELVGELALTGALRGVP---GAISSATEAIKSG-------RKIIVAKDNEDE 145

  Fly   437 EG---------KDHIFPPERVELLQLLA---------KKPDIYDRLARAIAPSIYE---NDDIKK 480
            .|         .||         ||.:.         ::|...|.::||:...:.:   .:..|:
E. coli   146 VGLINGEGCLIADH---------LQAVCAFLEGKHALERPKPTDAVSRALQHDLSDVIGQEQGKR 201

  Fly   481 GILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVPRSQYTSGRGSSAV-G 544
            |:.:...||    |            :|||.|.|||.|:.:...:..|:|.........|:|: .
E. coli   202 GLEITAAGG----H------------NLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILS 250

  Fly   545 LTAYVTKDPETRQLVLQT-------------------GALVLADNGVCCIDEFDKMNDSTRSVLH 590
            |....:...:.||...::                   |.:.||.|||..:||..:....|...|.
E. coli   251 LVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALR 315

  Fly   591 EVMEQQTLSIAKAGIICQLNARTSILAAANPAES---QWNKRKNIIDNV-----QLPHTLLSRFD 647
            |.:|...:.:::........||..::||.||:.:   |.|..:...:..     :|....|.|||
E. coli   316 EPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFD 380

  Fly   648 LIFLVLDPQDEIFDKRL----ASHLVSLYYVTRHEEE-------DTMFDMSVLRDYIAYARE--- 698
            |...:..|...|..|.:    :|..|....:...|.:       :...|...:|.:.....|   
E. coli   381 LSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAM 445

  Fly   699 -------HLSPTLSDEAQQRLIQ 714
                   ||.  ||..|.|||::
E. coli   446 WLEGTLIHLG--LSIRAWQRLLK 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_477185.1 PHA03307 2..>150 CDD:223039
MCM_N 165..267 CDD:464206
MCM 270..772 CDD:214631 99/478 (21%)
yifBNP_418214.2 PRK09862 1..506 CDD:182120 99/478 (21%)
Blue background indicates that the domain is not in the aligned region.

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