DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpa and MCM2

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_009530.1 Gene:MCM2 / 852258 SGDID:S000000119 Length:868 Species:Saccharomyces cerevisiae


Alignment Length:862 Identity:251/862 - (29%)
Similarity:392/862 - (45%) Gaps:184/862 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SDNISLPPTSP-----GNISLPATSPARGLGA------------------------NMSEIDLSS 81
            |:| .|||:||     |.:: |.:||   :|:                        .|:|:||..
Yeast    16 SEN-ELPPSSPQQHFRGGMN-PVSSP---IGSPDMINPEGDDNEVDDVPDIDEVEEQMNEVDLMD 75

  Fly    82 PLNYG-----------TPSSMGSIRTPRSGIRGTPLRARPDIRTDKR---IRQVAI--------G 124
            ...|.           .|..:.........:..   |.|.|.:.::|   :|.||.        .
Yeast    76 DNMYEDYAADHNRDRYDPDQVDDREQQELSLSE---RRRIDAQLNERDRLLRNVAYIDDEDEEQE 137

  Fly   125 GGSGLE----PIPEK-----------------GSETTDPVSE--------SSQAPQLVVWGTNVV 160
            |.:.|:    |:..:                 .....||:.|        :.:|.....|.|...
Yeast   138 GAAQLDEMGLPVQRRRRRRQYEDLENSDDDLLSDMDIDPLREELTLESLSNVKANSYSEWITQPN 202

  Fly   161 VSQCKSK-FKSFIMRFIDPSAEQDEISENIDVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQD 224
            ||:..:: .|||::.:.|            :..:.:|..::..:..:....|.:|..||......
Yeast   203 VSRTIARELKSFLLEYTD------------ETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAI 255

  Fly   225 LYRQLICYPQEVIPGFDMAINEMFFERYP-AALLEHQIQVRPFNADKTRNMRSLNPEDMDQLISI 288
            |...|...|:|::..||:...|.....|| .|.:..:|.||..:.....::|.|...::..|:.:
Yeast   256 LALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRV 320

  Fly   289 SGMVIRSSNVIPEMREAFFSCNICSFSTTVEVDRGRINQP-----------TLCTNCNTNHCFRL 342
            :|:|.|.:.|.|:::...|:|..|          |.|..|           :.||||.:...||:
Yeast   321 TGVVTRRTGVFPQLKYVKFNCLKC----------GSILGPFFQDSNEEIRISFCTNCKSKGPFRV 375

  Fly   343 IHNRSEFTDKQLVKLQESPDDMAAGQTPHN--VLLYAHNDLVDKVQPGDRVTVTGIYRATPLKTG 405
            ...::.:.:.|.|.|||:|..:..|:.|.:  |:|.|  ||||..:||:.|.|||||:..  ..|
Yeast   376 NGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLA--DLVDVSKPGEEVEVTGIYKNN--YDG 436

  Fly   406 GLSSSVKS---VYKTHVDVVHFRKVDNKRLYEDEEGKDHIF--PPERVELLQLLAKKPDIYDRLA 465
            .|::  |:   |:.|.::....::.:.....|.|||.| :|  ..|.....:.:::...|.|::.
Yeast   437 NLNA--KNGFPVFATIIEANSIKRREGNTANEGEEGLD-VFSWTEEEEREFRKISRDRGIIDKII 498

  Fly   466 RAIAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVP 530
            .::|||||.:.|||..:...||||..|.  ..|:.:.|.:|::||.|||||:|||:|:||.....
Yeast   499 SSMAPSIYGHRDIKTAVACSLFGGVPKN--VNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAH 561

  Fly   531 RSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLHEVMEQ 595
            |:.:.:|:|:|||||||.|.|||.|::..|:.|||||||.|||.|||||||||..|:.:||.|||
Yeast   562 RAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQ 626

  Fly   596 QTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDPQDEIF 660
            |::||:||||:..|.||.||:|||||...::|....:..||.|...:|||||::.:|.|..||..
Yeast   627 QSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEA 691

  Fly   661 DKRLASHLVSLYYVTRH--------------------------------------------EEED 681
            |:|||:.:|. .:|..|                                            |||.
Yeast   692 DERLATFVVD-SHVRSHPENDEDREGEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEI 755

  Fly   682 TMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVDMRKVGAGRGQISAYPRQLESLIRLSEAH 746
            :.....:|..||.|||..:.|.|......::.:.|.|:|:.....|......|.|||::|::|:.
Yeast   756 SPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESF 820

  Fly   747 AKVRLSNQVELLDVEEA 763
            ||:|||..|...|::.|
Yeast   821 AKMRLSEFVSSYDLDRA 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039 31/183 (17%)
MCM_N 168..267 CDD:379644 22/99 (22%)
MCM 270..772 CDD:214631 193/556 (35%)
MCM2NP_009530.1 MCM2_N 49..193 CDD:403724 20/146 (14%)
MCM_N 209..298 CDD:405270 22/100 (22%)
MCM 302..846 CDD:214631 193/556 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54431
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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