DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and MCM2

DIOPT Version :10

Sequence 1:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_175112.2 Gene:MCM2 / 841056 AraportID:AT1G44900 Length:936 Species:Arabidopsis thaliana


Alignment Length:735 Identity:227/735 - (30%)
Similarity:380/735 - (51%) Gaps:114/735 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 KFKSFIMRFIDPSAEQDEISENIDVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLIC 231
            |||.|::.::.|..|..:|.         |::.:.|:.:..:..|.::.........::...|..
plant   221 KFKDFLLTYVKPKNENGDIE---------YVRLINEMVSANKCSLEIDYKEFIHVHPNIAIWLAD 276

  Fly   232 YPQEVIPGFDMAINEMFFERYPAALLEH-QIQVR----PFNADKTRNMRSLNPEDMDQLISISGM 291
            .||.|:...:....::.|:.:|.....| :|.||    |.| |:.||:|.::   ::.:|.|.|:
plant   277 APQPVLEVMEEVSEKVIFDLHPNYKNIHTKIYVRVTN
LPVN-DQIRNIRQIH---LNTMIRIGGV 337

  Fly   292 VIRSSNVIPEMREAFFSCNIC----------SFSTTVEVDRGRINQPTLCTNCNTNHCFRLIHNR 346
            |.|.|.|.|::::..:.||.|          |:|   ||..|.      |:.|.:...|.:...:
plant   338 VTRRSGVFPQLQQVKYDCNKCGAVLGPFFQNSYS---EVKVGS------CSECQSKGPFTVNVEQ 393

  Fly   347 SEFTDKQLVKLQESPDDMAAGQTPHNVLLYAHNDLVDKVQPGDRVTVTGIYRATPLKTGGLSSSV 411
            :.:.:.|.:.:||||..:.||:.|.:..:...|||:|..:||:.:.|||||    .....||.:.
plant   394 TIYRNYQKLTIQESPGTVPAGRLPRHKEVILLNDLIDCARPGEEIEVTGIY----TNNFDLSLNT 454

  Fly   412 KSVYKTHVDVVHFRKVDNKR----LYE-DEEGKDHIFPPERVELLQLLAKKPDIYDRLARAIAPS 471
            |:.:.....||....|..|:    .|: .:|.|..|         :.|:|.|.|.:|:.::||||
plant   455 KNGFPVFATVVEANYVTKKQDLFSAYKLTQEDKTQI---------EELSKDPRIVERIIKSIAPS 510

  Fly   472 IYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVPRSQYTS 536
            ||.::|||..:.|.:|||.:|.  ..|:...|.:|::||.|||||:|||.|:||.....|:.||:
plant   511 IYGHEDIKTALALAMFGGQEKN--IKGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTT 573

  Fly   537 GRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLHEVMEQQTLSIA 601
            |:|:|||||||.|.|||.||:..|:.|||||||.|:|.|||||||||..|..:||.||||::||:
plant   574 GKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISIS 638

  Fly   602 KAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDPQDEIFDKRLAS 666
            ||||:..|.||.|::|||||...:::..|:...||:|...:|||||::.:|.|..|.:.|:.||.
plant   639 KAGIVTSLQARCSVIAAANPVGGRYDSSKSFAQNVELTDPILSRFDILCVVKDVVDPVTDEMLAE 703

  Fly   667 HLVSLYYVT-----RHEEED--------------TMFDMSVLRDYIAYAREHLSPTLSDEAQQRL 712
            .:|:.::.:     :.|:.|              .:...::|:.|:.|::.::.|.|.:...::|
plant   704 FVVNSHFKSQPKGGKMEDSDPEDGIQGSSGSTDPEVLPQNLLKKYLTYSKLYVFPKLGELDAKKL 768

  Fly   713 IQAYVDMRKVGAGRGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRLHREALKQSATD 777
            ...|.::|:.......:|...|.|||:||:|||||::.|...|...||..|.|:           
plant   769 ETVYANLRRESMNGQGVSIATRHLESMIRMSEAHARMHLRQYVTEEDVNMAIRV----------- 822

  Fly   778 PLSGKIDVGILTTGLSTAARKKRADLVAAIKENLKKKGKVLTVPYQKLFSDIKEGSQIMITREQF 842
                     :|.:.:||    ::..:...::|:.|:     .:.|:|.|:.:    .:::.:|..
plant   823 ---------LLDSFIST----QKFGVQRTLRESFKR-----YITYKKDFNSL----LLVLLKELV 865

  Fly   843 EDALKEVQDEGAIVVMGKNT 862
            ::|||..:     ::.|.|:
plant   866 KNALKFEE-----IISGSNS 880

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_477185.1 PHA03307 2..>150 CDD:223039
MCM_N 165..267 CDD:464206 21/104 (20%)
MCM 270..772 CDD:214631 190/535 (36%)
MCM2NP_175112.2 MCM2_N 67..>138 CDD:403724
MCM_N 220..313 CDD:464206 20/100 (20%)
MCM 320..828 CDD:214631 191/554 (34%)
Blue background indicates that the domain is not in the aligned region.

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