DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpa and mcm6l

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001020704.1 Gene:mcm6l / 564982 ZFINID:ZDB-GENE-050913-141 Length:824 Species:Danio rerio


Alignment Length:832 Identity:243/832 - (29%)
Similarity:393/832 - (47%) Gaps:155/832 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 LEP-IPEKGSETTDPVSESSQAPQLVVWGTNVVVSQCKSKFKSFIMRFIDPSAEQDEISENIDVN 192
            :|| :...|....|.:||                 :|:..|..|:..|.|.:.:           
Zfish     1 MEPGVEAAGVHVRDELSE-----------------KCQKLFLEFLEEFQDKNGD----------- 37

  Fly   193 QPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAINEMFFERYPAALL 257
             .|||...:|:...|...|.::.::::.::|.|               ...|.|.::..||....
Zfish    38 -ALYLSDAQELIRPERNTLTVSFSNIEHYNQQL---------------ATTIQEEYYRVYPFLCR 86

  Fly   258 EHQIQVRPFNAD------------------KTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMRE 304
                .||.|..|                  ..:.:|.|:...:..|:.|||.|:|:..|.||:..
Zfish    87 ----AVRHFARDHGNIPPSKEFYVAFSEFPSRQKIRELSTVRIGTLLRISGQVVRTHPVHPELVS 147

  Fly   305 AFFSCNICSFSTTVEVDRG-RINQPTLCTN--CNTNHCFRLIHNRSEFTDKQLVKLQESPDDMAA 366
            ..|.|..|. |...:|::. :..|||:|.|  |.....|.|..|:|.|.|.|..::||:..::..
Zfish   148 GTFLCLDCQ-SVIKDVEQQFKYTQPTICKNPVCANRRRFMLDTNKSRFVDFQKGRIQETQAELPR 211

  Fly   367 GQTPHNVLLYAHNDLVDKVQPGDRVTVTGIYRATP-------------------LKTGGLSSSVK 412
            |..|.:|.:....:.|:..|.|||...||.....|                   .|.|..:..::
Zfish   212 GSIPRSVEVILRAEAVETAQAGDRCDFTGTLVVVPDVSAMALAGTRAETSSRVTGKEGFETDGIQ 276

  Fly   413 SVYKTHVDVVHFR-------------KVDNKRLYEDEEGKDHIFPPERVELLQL-----LAKKPD 459
            .:....|..:.:|             :...|.|.::::..:.:  ..::.:|:.     :::..:
Zfish   277 GLKALGVRELSYRLAFLANYVAPTNPRFGGKELRQEDQTAESV--KNQMTVLEWEKVFEMSQDKN 339

  Fly   460 IYDRLARAIAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQY 524
            :|..|..::.|:|:.||:||:||||.||||..|  .|:...:.|.:|::.:.|||.|||||.|::
Zfish   340 LYHNLCTSLFPTIHGNDEIKRGILLMLFGGVAK--TTMEGTSLRGDINVCIVGDPSTSKSQFLKH 402

  Fly   525 VFNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVL 589
            |.:..||:.||||:.|||.||||.|.||.|:.:.|::.|||:|||||||||||||||:...:..:
Zfish   403 VEDFAPRAVYTSGKASSAAGLTAAVVKDEESHEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAI 467

  Fly   590 HEVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLD 654
            ||.|||||:||.|||:...|||||||||||||.:.::|:.|::..||.:...::|||||.|:::|
Zfish   468 HEAMEQQTISITKAGVKATLNARTSILAAANPIDGRYNRAKSLKQNVNMSAPIMSRFDLFFILVD 532

  Fly   655 PQDEIFDKRLASHLVSLYYVTRHEEEDTMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVDM 719
            ..:|:.|..:|..:|.| :....|..:.::....::.||.:||: ..|.::.|||:.::..|..:
Zfish   533 ECNEVTDYAIARRIVDL-HARNVESVERVYSTDEIQRYILFARQ-FQPKITVEAQEFVVDQYKRL 595

  Fly   720 RKVGAGRGQISAY---PRQLESLIRLSEAHAKVRLSNQVELLDVEEAWR-LHREALKQSATD--- 777
            |:...|....||:   .|||||::||||..|::..|::|:...|:||:| |::..::..:.|   
Zfish   596 RQRDGGGTTKSAWRITVRQLESMLRLSEGMARLYCSDEVQPKHVKEAFRLLNKSIIRVDSPDINF 660

  Fly   778 -------------PLSGKI-------DV-GILTTGLSTAARKKRADLVAAIKENL-------KKK 814
                         .|.||.       || |.....:.|...:| .:..||.|..|       |:.
Zfish   661 DQEHDEDNINDQNELFGKETEGQNGGDVNGHAVEDMETDQTEK-PEKPAAAKPALRMSFAEYKRV 724

  Fly   815 GKVLTVPYQKLFSDIKEGSQIMITREQFEDALKEVQ---DEGAIVVMGKNTI 863
            ..:|.:..||: ..:.|.|.:. ..|.....|||::   |..|.:|..||.|
Zfish   725 SNLLVLHMQKM-EQLDEDSSLK-KSELINWYLKEIESEIDSEAELVAKKNLI 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039 6/21 (29%)
MCM_N 168..267 CDD:379644 18/98 (18%)
MCM 270..772 CDD:214631 187/545 (34%)
mcm6lNP_001020704.1 MCM_N 23..133 CDD:291233 24/140 (17%)
MCM 116..651 CDD:214631 187/541 (35%)
P-loop_NTPase <441..528 CDD:304359 52/86 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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