DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and mcm9

DIOPT Version :10

Sequence 1:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001333089.1 Gene:mcm9 / 555610 ZFINID:ZDB-GENE-041014-310 Length:1135 Species:Danio rerio


Alignment Length:640 Identity:192/640 - (30%)
Similarity:309/640 - (48%) Gaps:101/640 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 FKSFIMRFIDPSAEQDEISENI-DVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLIC 231
            |::::|.. ..|..|..:.||. |::.|:.:..:    ||.|..:.:.    :.|:        .
Zfish    17 FETYVMEH-HKSDIQQILQENTEDLHYPVVVNAM----TLFEDNMEVG----ECFN--------A 64

  Fly   232 YPQEVIPGFDMAINEMFFERYPAAL-------------LEHQIQVR----PFNADKTRNMRSLNP 279
            :|.:|:|.||.|:     :|...|:             |:|.:.||    |...:.||: .....
Zfish    65 FPSKVLPIFDNAL-----QRAAQAISQSSSSSPQDTFRLKHNMHVRISGLPVCPELTRD-HIPKA 123

  Fly   280 EDMDQLISISGMVIRSS--NVIPEMREAFFSCNICSFSTTVEVDRGRINQPTLCTNCNTNH-CFR 341
            .|:...:|::|.|||:|  .|:...|:  :.||.|....:|:....:....|..|:|.:.. |  
Zfish   124 RDVGHFLSVTGTVIRTSVTKVLEYERD--YMCNKCRHVFSVQASFEQFYTFTPPTSCPSEEGC-- 184

  Fly   342 LIHNRSEFT-------------DKQLVKLQESPDDMAAGQTPHNVLLYAHNDLVDKVQPGDRVTV 393
               ...:||             |.|.:|:||....::.|..|.::|:...:||||..:.||.:||
Zfish   185 ---GSFKFTCLSGSDAPPAACKDYQEIKIQEQVQKLSVGSIPRSMLIILEDDLVDSCKSGDDITV 246

  Fly   394 TGI--YRATPLKTGGLSSSVKSVYKTHVDVVHFRKVDNKRLYED-----EEGKD-HIFPP--ERV 448
            .|:  .|..|: .......|:.|.|.:...|:..:.....:.||     ||..| |...|  .|.
Zfish   247 YGVVCQRWKPM-FQDCRCDVEIVLKANYIEVNNEQSTTALVLEDIQKEFEEFWDSHKHDPIAGRN 310

  Fly   449 ELLQLLAKKPDIYDRLARAIAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGD 513
            |:|.              ::.|.::....:|..:.:.|.||.::..|:  ....|.|.||||.||
Zfish   311 EILM--------------SLCPQVFGMYVVKLAVAMVLAGGVQRIDAS--GTKVRGESHLLLVGD 359

  Fly   514 PGTSKSQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEF 578
            |||.|||.|:|...:.|||..|:|.||:..|||....||  :.:..|:.|||||:|.|:||||||
Zfish   360 PGTGKSQFLKYAAKITPRSVLTAGIGSTNAGLTVAAVKD--SGEWHLEAGALVLSDGGLCCIDEF 422

  Fly   579 DKMNDSTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLL 643
            :.:.:..|:.:||.|||||:|:||||::|:|:.||:||||.|| :.|::...::..||.|...||
Zfish   423 NSIKEHDRTSIHEAMEQQTISVAKAGMVCKLDTRTTILAATNP-KGQYDPNVSVSVNVALASPLL 486

  Fly   644 SRFDLIFLVLDPQDEIFDKRLASHLVSLYYVTRHEEEDTMFDMSVLRDYIAYAREHLSPTLSDEA 708
            |||||:.::||.::..:||.::|.:  |.......|...::.|..:|.|....:. |.|.::.||
Zfish   487 SRFDLVLVLLDTKNPDWDKIISSFI--LQNKGAPSESLCLWSMEKMRAYFCLIKT-LKPRITPEA 548

  Fly   709 QQRLIQAYVDMRKVGAGRGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEA 763
             ..::..|..:::....|.......|.||||.||:||||::...   |.:.||:|
Zfish   549 -NTILSRYYQLQRQSDSRNAARTTIRMLESLSRLAEAHARLMFR---ETVTVEDA 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_477185.1 PHA03307 2..>150 CDD:223039
MCM_N 165..267 CDD:464206 25/116 (22%)
MCM 270..772 CDD:214631 167/520 (32%)
mcm9NP_001333089.1 Mcm2 16..593 CDD:440854 188/632 (30%)
MCM9 311..609 CDD:350666 115/315 (37%)
Blue background indicates that the domain is not in the aligned region.

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