DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and Mcm9

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_038955210.1 Gene:Mcm9 / 499437 RGDID:1560557 Length:1128 Species:Rattus norvegicus


Alignment Length:691 Identity:203/691 - (29%)
Similarity:339/691 - (49%) Gaps:128/691 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 EQDEISENIDVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAIN 245
            |:||     |.:.||.:..:    ||.|..:.:.         |.:   ..:|.||:..||.|:.
  Rat    31 ERDE-----DAHYPLVVNAM----TLFETNMEIG---------DYF---TVFPNEVLTVFDSALR 74

  Fly   246 EMFFERYPAALLEHQIQVRPFNADKTRNMRS------LNPE----------DMDQLISISGMVIR 294
            .       :||...|....|......:|:.:      :.||          |:...:|::|.|||
  Rat    75 R-------SALAVLQSLPEPEGLSMKQNLHARISGLPVCPELVREHIPKTKDVGHFLSVTGTVIR 132

  Fly   295 SSNVIPEMREAFFSCNICSFSTTVEVDRGR---INQPTLCTNCNTNHCFRLIHNRSEFT------ 350
            :|.|.....|..:.||.|.:..||:.|..:   .::|:.|.:.:|  |     :.|:||      
  Rat   133 TSLVKVLEFERDYMCNKCKYVFTVKADFEQYYTFSRPSSCPSSDT--C-----DSSKFTCLSDLS 190

  Fly   351 -------DKQLVKLQESPDDMAAGQTPHNVLLYAHNDLVDKVQPGDRVTVTGI--YRATPLKTGG 406
                   |.|.:|:||....::.|..|.::.:...:||||..:.||.:|:.|:  .|..|.:. .
  Rat   191 ASPARCRDYQEIKIQEQVQRLSVGSIPRSMKVILEDDLVDSCKSGDDLTIYGVVMQRWKPFQR-D 254

  Fly   407 LSSSVKSVYKTHVDVVHFRKVDNKR---LYEDEEGK-------DHIFPPERVELLQLLAKKPDIY 461
            :...|:.|.|     .::.:|:|::   :..||:.:       :|.              |.|.:
  Rat   255 MRCEVEIVLK-----ANYVQVNNEQSSGMVMDEDARKEFEDFWEHY--------------KSDPF 300

  Fly   462 ---DRLARAIAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQ 523
               :.:..::.|.::....:|..:.:.|.||.::..|...|  .|.|.||||.|||||.|||.|:
  Rat   301 AGRNEILASLCPQVFGMYLVKLAVAMVLAGGIQRTDAAGTR--VRGESHLLLVGDPGTGKSQFLK 363

  Fly   524 YVFNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMNDSTRSV 588
            |...:.|||..|:|.||::.|||....||  :.:..|:.|||||||.|:||||||:.:.:..|:.
  Rat   364 YAAKITPRSVLTTGIGSTSAGLTVTAVKD--SGEWNLEAGALVLADAGLCCIDEFNSLKEHDRTS 426

  Fly   589 LHEVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVL 653
            :||.|||||:|:||||::|:||.||:||||.|| :.|::.::::..|:.|...||||||||.::|
  Rat   427 IHEAMEQQTISVAKAGLVCKLNTRTTILAATNP-KGQYDPQESVSVNIALGSPLLSRFDLILVLL 490

  Fly   654 DPQDEIFDKRLASHLV-SLYYVTRHEEEDTMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYV 717
            |.::|.:|:.::|.:: :..|.::.|   .::.|..::.|....| :|.|||||.:.|.|:: |.
  Rat   491 DTRNEDWDRIISSFILENKGYPSKSE---NLWSMEKMKTYFCLIR-NLHPTLSDVSNQVLLR-YY 550

  Fly   718 DMRKVGAGRGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRLHREALKQSATDPLSGK 782
            .|::....|.......|.|||||||:||||::...:.|.|.|......:...:::..|.  |.| 
  Rat   551 QMQRQSDSRNAARTTIRLLESLIRLAEAHARLMFRSTVTLEDAITVVSVMESSMQGGAL--LGG- 612

  Fly   783 IDVGILTTGLSTAARK----------KRADLVAAIKENLKK 813
              |..|.|....:.|.          ::.:|.:.::|.|::
  Rat   613 --VNALHTSFPESPRAQYRRQCELILEKLELQSLLQEELRR 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039
MCM_N 168..267 CDD:379644 20/85 (24%)
MCM 270..772 CDD:214631 173/549 (32%)
Mcm9XP_038955210.1 MCM_OB 116..243 CDD:407328 36/133 (27%)
MCM9 305..603 CDD:350666 121/307 (39%)
PHA03307 667..>1014 CDD:223039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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