DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and Mcm5

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_524308.2 Gene:Mcm5 / 41296 FlyBaseID:FBgn0017577 Length:733 Species:Drosophila melanogaster


Alignment Length:751 Identity:252/751 - (33%)
Similarity:381/751 - (50%) Gaps:116/751 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 KSKFKSFIMRFIDPSAEQDEISENIDVNQPLYLQKLEEIHTLEEPYLN------LNCAHLKTFDQ 223
            |.|:|.||..|                |:..:..|..:  ||:..|||      :....|..||:
  Fly    31 KKKYKEFIRTF----------------NEENFFYKYRD--TLKRNYLNGRYFLEIEMEDLVGFDE 77

  Fly   224 DLYRQLICYPQEVIPGFDMAINEMFFERYPAALLEHQ-----IQV-RPFNADKTRNMRSLNPEDM 282
            .|..:|...|.|.:..|:.|..|: .:...|...||:     ||: ...||:.| |:|.|..:.:
  Fly    78 TLADKLNKQPTEHLEIFEEAAREV-ADEITAPRPEHEEHMHDIQILLSSNANPT-NIRQLKSDCV 140

  Fly   283 DQLISISGMVIRSSNVIPEMREAFFSCNICS-FSTTVEVDRGRINQPTLCTNCNTNHC------- 339
            .:|:.|:|:::.:|.:..:.......|..|| ....::|:.| :....|...|||...       
  Fly   141 SKLVKIAGIIVAASGISAKATRMSIQCLSCSTVIPNLKVNPG-LEGYALPRKCNTEQAGRPKCPL 204

  Fly   340 --FRLIHNRSEFTDKQLVKLQESPDDMAAGQTPHNVLLYAHNDLVDKVQPGDRVTVTGIYR---- 398
              |.::.::.:..|.|.:||||.||.:..|:.|.::.|:....|.::|.||:||.:.|||.    
  Fly   205 DPFFIMPDKCKCVDFQTLKLQELPDFVPQGEIPRHLQLFCDRSLCERVVPGNRVLIQGIYSIRKV 269

  Fly   399 ATPLKTGGLSSSVKSVYKTHVDVVHFRKVDNK---------RLYEDEEGKDHIFPPERVELLQLL 454
            ..|.:..|...:|..|...::.||.. .||::         .:..|||           |..:.:
  Fly   270 GKPSRRDGREKAVVGVRAPYMRVVGI-TVDSEGAGAISRYSNITSDEE-----------EHFRRM 322

  Fly   455 AKKPDIYDRLARAIAPSIYENDDIKKGILLQLFGGTKKKHAT-LGRQNFRSEIHLLLCGDPGTSK 518
            |...|||:||::::||||:.:.||||.|...||||::|:... |.|   |.:|::||.|||||:|
  Fly   323 AASGDIYERLSQSLAPSIFGSRDIKKAITCMLFGGSRKRLPDGLCR---RGDINVLLLGDPGTAK 384

  Fly   519 SQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMND 583
            ||:|::|..:.|.:.||||:||||.||||.|.|||:||..|::.||:||||.||.||||||||.:
  Fly   385 SQLLKFVEKVAPIAVYTSGKGSSAAGLTASVMKDPQTRNFVMEGGAMVLADGGVVCIDEFDKMRE 449

  Fly   584 STRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDL 648
            ..|..:||.|||||:|||||||...||:|.|:|||||....:|:..|. .:|:....|:|||||:
  Fly   450 DDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSIFGRWDDTKG-EENIDFMPTILSRFDM 513

  Fly   649 IFLVLDPQDEIFDKRLASHLVSLYYVTR----HEEEDTMFDMSVLRDYIAYAREHLSPTLSDEAQ 709
            ||:|.|..||..|..||.|:::::..:.    .|..:....:|..:.||.|.|.|..|.||:.|.
  Fly   514 IFIVKDIHDESRDITLAKHIINVHLSSNKSAPSEPAEGEISLSTFKKYIHYCRTHCGPRLSEAAG 578

  Fly   710 QRLIQAYVDMRKVGAG--------RGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRL 766
            ::|...||.||. |||        |..|....||||::||:||:.||:||........|.||.||
  Fly   579 EKLKSRYVLMRS-GAGQQEKASDKRLSIPITVRQLEAVIRISESLAKIRLQPFATDEHVNEALRL 642

  Fly   767 HR-EALKQSATDPLSGKIDVGILTTGLSTAARKKRADLVAAIKENLKKKGKVLTVPYQKLFSDIK 830
            .: ..|..:.|..|:|       ..|.:|   ::..:.:..|::.||::..:             
  Fly   643 FQVSTLDAAMTGSLAG-------AEGFTT---EEDQETLNRIEKQLKRRFAI------------- 684

  Fly   831 EGSQIMITREQ--FEDALKEVQDEGAIVVMGKNTIR 864
             |||:   .||  .:|.|::..:|..::.:....||
  Fly   685 -GSQV---SEQNILQDFLRQKYEERTVMKVIHTMIR 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039
MCM_N 168..267 CDD:379644 26/110 (24%)
MCM 270..772 CDD:214631 203/538 (38%)
Mcm5NP_524308.2 MCM_N 31..124 CDD:405270 28/111 (25%)
MCM 128..648 CDD:214631 203/538 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446136
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15169at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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