DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and mcm6

DIOPT Version :10

Sequence 1:NP_477185.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_989393.1 Gene:mcm6 / 395030 XenbaseID:XB-GENE-962678 Length:823 Species:Xenopus tropicalis


Alignment Length:801 Identity:238/801 - (29%)
Similarity:386/801 - (48%) Gaps:148/801 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ETTDPVSESSQAPQLVVWGTNVV---VSQ-CKSKFKSFIMRFIDPSAE---QDEISENI------ 189
            :..|| |:|:.|..    ||..|   ||: |:..|:.|:..|.....|   |.:..|.|      
 Frog     2 DLVDP-SQSAAAAA----GTQTVKDEVSEKCQKLFQDFLEEFRGSDGELKYQSDAEELIRPERNT 61

  Fly   190 ---------DVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAIN 245
                     ..||.|.....||.:.: .|||   |..:|.|.:|...    .||          |
 Frog    62 LLVSFIDLEQFNQQLATTIQEEFYRV-YPYL---CRAVKAFARDHGN----VPQ----------N 108

  Fly   246 EMFFERYPAALLEHQIQVRPFNADKTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSCN 310
            :.|:..:......|:|             |.|....:..|:.|||.|:|:..|.||:....|.|.
 Frog   109 KEFYVAFQDLPTRHKI-------------RELTTPRIGSLLRISGQVVRTHPVHPELVSGTFLCL 160

  Fly   311 ICSFSTTVEVDRGRINQPTLCTN--CNTNHCFRLIHNRSEFTDKQLVKLQESPDDMAAGQTPHNV 373
            .|.........:.:..||::|.|  |.....|.|..|:|.|.|.|.|::||:..::..|..|.:|
 Frog   161 DCQTLVRDVEQQFKYTQPSICRNPVCANRRRFMLDTNKSRFVDFQKVRIQETQAELPRGSIPRSV 225

  Fly   374 LLYAHNDLVDKVQPGDRVTVT---------------GIYRATPLKTGGL----SSSVKSVYKTHV 419
            .:....:.|:..|.|||...|               |:...|..:.||.    :..|:.:....|
 Frog   226 EVILRAEAVESCQAGDRCDFTGSLIVVPDISQLATPGVRAETSARVGGTEGYQAEGVQGLRALGV 290

  Fly   420 DVVHFRKV-------------DNKRLYED----EEGKDHIFPPERVELLQLLAKKPDIYDRLARA 467
            ..:.::.|             ..|.|:|:    |..|:.:...|..::.::...| ::|..|..:
 Frog   291 RDLSYKLVFLACYVCPTNPRFGGKDLHEEDMTAESIKNQMSVKEWEKVFEMSQDK-NLYHNLCTS 354

  Fly   468 IAPSIYENDDIKKGILLQLFGGTKKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVPRS 532
            :.|:::.||::|:||||.||||..|  .|:...:.|.:|::.:.|||.|:|||.|::|....||:
 Frog   355 LFPTVHGNDEVKRGILLMLFGGVPK--TTMEGTSLRGDINVCIVGDPSTAKSQFLKHVEEFSPRA 417

  Fly   533 QYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLHEVMEQQT 597
            .||||:.|||.||||.|.||.|:.:.|::.|||:|||||||||||||||:...:..:||.|||||
 Frog   418 VYTSGKASSAAGLTAAVVKDEESHEFVIEAGALMLADNGVCCIDEFDKMDTKDQVAIHEAMEQQT 482

  Fly   598 LSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDPQDEIFDK 662
            :||.|||:...|||||||||||||...::::.|::..|:.|...::|||||.|:::|..:|:.|.
 Frog   483 ISITKAGVKATLNARTSILAAANPVGGRYDRAKSLKQNINLSAPIMSRFDLFFILVDECNEVTDY 547

  Fly   663 RLASHLVSLYYVTRHEEE-DTMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVDMRK---VG 723
            .:|..:|.|:  :|.||. |.::.:..:|.|:.:||: ..|.:|.|::..:::.|..:|:   .|
 Frog   548 AIARRIVDLH--SRIEESIDRVYTLDEVRRYLLFARQ-FKPKISKESEDFIVEQYKRLRQRDGTG 609

  Fly   724 AGRGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRLHREAL----------------- 771
            ..:.......|||||:|||||..|::..|::|:...|:||:||..:::                 
 Frog   610 VTKSAWRITVRQLESMIRLSEGMARMHCSDEVQPKHVKEAFRLLNKSIIRVETPDVNLDQEDEHE 674

  Fly   772 -KQSATDPLSGKIDV--GI--LTTGLSTAARKKRADLVAAIKENLKKKGKVLTVPYQKLFSDIKE 831
             ::...:.::|...|  |:  ...|::..|.:..|   |..|.:|:..           |::.|.
 Frog   675 AEEEPQEVINGDASVPSGVNGHVNGMNGHAEEPNA---ATPKPSLRLN-----------FAEYKR 725

  Fly   832 GSQIMITREQFEDALKEVQDE 852
            .|.:::.:      |::::||
 Frog   726 ISNLLVLQ------LRKMEDE 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_477185.1 PHA03307 2..>150 CDD:223039 4/11 (36%)
MCM_N 165..267 CDD:464206 25/119 (21%)
MCM 270..772 CDD:214631 187/561 (33%)
mcm6NP_989393.1 MCM_N 28..117 CDD:464206 23/106 (22%)
MCM 120..658 CDD:475121 189/556 (34%)
Arginine finger 529..532 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 666..713 7/49 (14%)
MCM6_C 714..819 CDD:465688 7/44 (16%)

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