DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and mei-218

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_001027068.1 Gene:mei-218 / 3772646 FlyBaseID:FBgn0002709 Length:1186 Species:Drosophila melanogaster


Alignment Length:889 Identity:167/889 - (18%)
Similarity:272/889 - (30%) Gaps:318/889 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SPARSPSVGGATPKQGARTPTRGIASQDVETPMRMGPGRAVRPSDNISLPPTSPGNISLPATSPA 67
            |||:..||     ...:..|.| ||.:. :|....||. .|...|...:|||...:.......|.
  Fly   411 SPAKRASV-----TNNSSAPIR-IAPRQ-QTTQSSGPS-VVHNEDEDVMPPTPNQSERRQRRFPR 467

  Fly    68 RGLGANMSEIDLSSPLNYGTPSSM--GSIRTPRSGI-------RGTPLRARPDIRTDKRIRQVAI 123
            |.....|.. .|.:.....|.|.:  .|.:||...:       :...:::.|:|.....:|::|:
  Fly   468 RNHNPRMVR-SLQAVSREFTESLLEGSSGKTPEKEVVPYQQQEKPRQVKSSPEIHASSHMRKLAM 531

  Fly   124 G---GGSGLEPIPEKGSETTDPVSESSQAPQLVVWGTNVVVSQCKSKFKSFIMRFIDPSAEQDEI 185
            |   ..:..|..|...|..|..||..||             .:|:.:|..               
  Fly   532 GSVLNSNAKEFHPTGESHLTHKVSRLSQ-------------RRCRQRFTR--------------- 568

  Fly   186 SENIDVNQPLYLQKLEEIHTLEEPYLNLNCAHLKTFDQDLYRQLICYPQEVIPGFDMAINEMFFE 250
            |.:...|.|  .::|....:..||.|....   :..||.      |.|::.:   |..|..:   
  Fly   569 SLHAKKNNP--REQLPNPDSAPEPILEYTS---EIDDQP------CPPRQTV---DTPIEAI--- 616

  Fly   251 RYPAALLEHQIQVRPFNADKTRNMRSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSCNICSFS 315
             .|.|::|         ...|.|:..:...|..     ||::  .||..|::             
  Fly   617 -VPPAMIE---------VSATGNLPPVFYFDQQ-----SGII--WSNSSPQI------------- 651

  Fly   316 TTVEVDRGRINQPTL------CTNCNTNHCFRLIHNRSEFTDKQLVKLQESP---DDMAAGQTPH 371
             .||:....::|...      ||...|.       |...||        .||   ..|::.:.| 
  Fly   652 -PVEIQSNSVSQSVFRLASLPCTGVGTT-------NMDIFT--------SSPPPIQHMSSSRLP- 699

  Fly   372 NVLLYAHNDLVDKVQPGDRVTVTGIYRATPLKTGGLSSSVKSVYKTHV---------DVVHFRKV 427
                                  :.|...|.|.....|..|::.::.|:         |:::.|.:
  Fly   700 ----------------------SSISGPTQLSHTLSSPPVENQHQQHLWESCIHQDEDLMYSRPL 742

  Fly   428 -----------------------------DNKRLYEDEEGKDHIF------PP-ERVELLQLLAK 456
                                         ...::..||.|:::.:      || ||..:.:..::
  Fly   743 LDMDQEETQPEQQDQEWQWESEIEPPSFQSENQVVADEHGEENAYLAKDAGPPLERHMIFRAPSQ 807

  Fly   457 ------KPDI-----------------YDRLARAIAPSIYENDD--------IKKGILLQLFGGT 490
                  |||:                 |...:...|.|...:.|        ..|.|||...   
  Fly   808 HGQEYPKPDLNCVPSSIKKLHHLISSQYSDYSFVYALSAQISQDCVPMDCFVYLKMILLASI--- 869

  Fly   491 KKKHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPET 555
                .::.....|:.|.|.:........:::|..|..|.||.     .|....||.......| |
  Fly   870 ----VSIESDEVRAPISLCIIATDSLMANRLLNKVGQLAPRF-----LGPHEYGLQPTFNALP-T 924

  Fly   556 RQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLHEVME-------------------------- 594
            |...:....|:||..||....::::::......|.:.:|                          
  Fly   925 RFNWIVASPLLLAQQGVYYAGDWNRLSKDQGCQLEKCIENGAVPVPQLHIDQPLKAAVWTYWQPN 989

  Fly   595 ---QQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDPQ 656
               .|||::||   :|.:.. ..|...|..:.|.||   :||........::....|..    |:
  Fly   990 NSTNQTLALAK---LCPIFG-LPIYMGAQASNSLWN---SIIQKHNAEGQIVVNDGLSI----PE 1043

  Fly   657 DEIFDKRLASHLVSLYYVTRHEEEDTMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVDMRK 721
            |   |.|:..||:       |:.:                     .||:|.||..|.:.||..||
  Fly  1044 D---DMRMLIHLL-------HQRK---------------------TTLTDGAQHMLQKYYVISRK 1077

  Fly   722 VGAGRGQISAYPRQLES-----LIRLSEAHAKVRLSNQVELLDV 760
                     ..|....|     |.:|:|..||:.|..:|...||
  Fly  1078 ---------ERPNVFSSKTYIVLKQLAECFAKLALRLEVLESDV 1112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039 39/158 (25%)
MCM_N 168..267 CDD:379644 17/98 (17%)
MCM 270..772 CDD:214631 110/610 (18%)
mei-218NP_001027068.1 PTZ00112 122..>417 CDD:240274 3/5 (60%)
MCM <1023..1116 CDD:278895 31/134 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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