DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and Mcm3

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_511048.2 Gene:Mcm3 / 31449 FlyBaseID:FBgn0284442 Length:819 Species:Drosophila melanogaster


Alignment Length:823 Identity:238/823 - (28%)
Similarity:361/823 - (43%) Gaps:205/823 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 EEPYLNLNCAHLKTFDQDLYRQLIC--------YPQEVIPGFDMAINEMFFERYPAALLEHQIQV 263
            :|....:...|:|....:..::||.        .||..:.....|.:|..  .:..||.|:...|
  Fly    22 DEEDQGIYAGHVKDMIAEKSKRLIVNVNDLKRKNPQRALGLLSNAADEQL--AFGRALKEYASTV 84

  Fly   264 RPFNADKTRNM---------------RSLNPEDMDQLISISGMVIRSSNVIPEMREAFFSC---- 309
            .|..|....::               |||....:..::.:.|:|.:.|.:.|::..:...|    
  Fly    85 DPGYAKMHEDLFVGFEG
CFGNRHVTPRSLTSIYLGNMVCVEGIVTKVSLIRPKVVRSVHYCPNTR 149

  Fly   310 --------NICSFSTTVEVDRGRINQPTLCTNCNTNHCFRLIHNRSEFTDKQLVKLQESPDDMAA 366
                    ::.||..   |..|.. .||...:.|   .....:..|.:.|.|.:.:||.|:...|
  Fly   150 KVMERKYTDLTSFEA---VPSGAA-YPTKDEDGN---LLETEYGLSVYKDHQTLTIQEMPEKAPA 207

  Fly   367 GQTPHNVLLYAHNDLVDKVQPGDRVTVTGIYRATPLKTGGLSSSVKSVYKTHVDVVHFRKV---D 428
            ||.|.:|.:...:||||:.:|||||.:.|.||..|.|.||.:|..            ||.|   :
  Fly   208 GQLPRSVDIVCDDDLVDRCKPGDRVQIVGSYRCLPGKRGGYTSGT------------FRTVLLAN 260

  Fly   429 NKRLYEDEEGKDHIFPPERVELLQLLAKKPDIYDRLARAIAPSIYENDDIKKGILLQLFGGTKK- 492
            |..|...|...|  ...|.:.|.:.|||..||::.|::::||||:.:..:|:.||..|.||.:| 
  Fly   261 NISLLSKESNLD--ISREDIMLCKKLAKNNDIFELLSKSLAPSIHGHAYVKQAILCLLLGGVEKI 323

  Fly   493 -KHATLGRQNFRSEIHLLLCGDPGTSKSQMLQYVFNLVPRSQYTSGRGSSAVGLTAYVTKDPETR 556
             .:.|    ..|.:|::||.|||..:|||:|:||.|..||:..|:|||||.|||||.||.|.||.
  Fly   324 LPNGT----RLRGDINVLLIGDPSVAKSQLLRYVLNTAPRAIPTTGRGSSGVGLTAAVTTDQETG 384

  Fly   557 QLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANP 621
            :..|:.||:||||.||.||||||||:|..|:.:||||||..::|:||||...||||.|:||||||
  Fly   385 ERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISKAGIHASLNARCSVLAAANP 449

  Fly   622 AESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDPQDEIFDKRLASHLV----------------- 669
            ...::::.|..::|:.|..:|||||||:|::||..|...|:.::.|:|                 
  Fly   450 VYGRYDQYKTPMENIGLQDSLLSRFDLLFVMLDVIDSDVDQMISDHVVRMHRYRNPKEADGEPLS 514

  Fly   670 -------SLYYVTRHEE-EDT--------------------MFDMSVLRDYIAYAREHLSPTLSD 706
                   ||.:|:..|| :||                    :..:..:|.||..|: .:.|.|.:
  Fly   515 MGSSYADSLSFVSSSEEKKDTEVYEKYDALLHGKSRQRHEKILSVEFMRKYIHIAK-CMKPKLGE 578

  Fly   707 EAQQRLIQAYVDMR-----KVGAGRGQ-ISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWR 765
            :|.:.:...|..:|     :....|.| |:|  |.||:|||||.|||:.|:|..|.:.|...|..
  Fly   579 QACEAIANEYSRLRSQEAVETDVARTQPITA--RTLETLIRLSTAHARARMSKSVTIDDAHAAIE 641

  Fly   766 LHREAL--------------KQSATDPLSGKIDVGILTTGLSTAARKKR---------------- 800
            |.:.|.              :.|.:|   .:.|.|..::..|.:.|.||                
  Fly   642 LVQFAYFKKVLDKDRPSKRRRNSGSD---AEDDNGEASSQRSPSRRSKRTRTATVGADSDEEDIE 703

  Fly   801 -----------------------ADLVAAIKENLKKKGKVLTVP--------------YQKLFSD 828
                                   |.|:|:.....:......|.|              .|:||.:
  Fly   704 PPQPDAGDLTRRETRRSLPARSVAMLMASPSSEEQSVATSTTEPAIISDARLGEFKNNLQRLFRE 768

  Fly   829 IKE--------------GSQIMITREQFEDALKEVQDEGAIVV 857
            .:|              |||...|..:.|.|:..:.::..|:|
  Fly   769 AREQSLALARITTAINVGSQEPFTAGEIEAAVHRMTEDNQIMV 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039
MCM_N 168..267 CDD:379644 14/67 (21%)
MCM 270..772 CDD:214631 198/598 (33%)
Mcm3NP_511048.2 MCM_N 18..101 CDD:379644 15/80 (19%)
MCM 106..648 CDD:214631 198/569 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446139
Domainoid 1 1.000 52 1.000 Domainoid score I661
eggNOG 1 0.900 - - E1_COG1241
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15169at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11630
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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