DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpa and mcm5

DIOPT Version :9

Sequence 1:NP_001286160.1 Gene:dpa / 35679 FlyBaseID:FBgn0015929 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_848523.2 Gene:mcm5 / 286747 ZFINID:ZDB-GENE-021209-1 Length:736 Species:Danio rerio


Alignment Length:730 Identity:249/730 - (34%)
Similarity:376/730 - (51%) Gaps:85/730 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 SQCKSKFKSFIMRFIDPSAEQDEISENIDVNQP----LYLQKLEEIHTLEEPYLNLNCAHLKTFD 222
            ||.|.||:.|:.:|            .:..::.    .|..:|:..:||.|.::.:....|.:||
Zfish    30 SQIKKKFREFLRQF------------RVGTDRTGFTYKYRDELKRHYTLGEYWIEVEMEDLASFD 82

  Fly   223 QDLYRQLICYPQEVIPGFDMAINEMFFE-RYPAALLE---HQIQVRPFNADKTRNMRSLNPEDMD 283
            :||...|...|.|.:|..:.|..|:..| ..|..:.|   ..|||...:.....::|||..|.:.
Zfish    83 EDLSDCLYKLPSENLPLLEEAAQEVADEVTRPRPVGEETVQDIQVMLKSDAHPASIRSLKSEQVS 147

  Fly   284 QLISISGMVIRSSNVIPEMREAFFSCNIC-SFSTTVEVDRGRINQPTLCTNCNTNHCFR------ 341
            :|:.|.|::|.|:.|..:.......|..| :..:.:.:..| :....|...|||....|      
Zfish   148 RLVKIPGIIISSTAVRAKATRVCLQCRGCRAVISNIPLPPG-LQGYALPRKCNTEQAGRVKCPVD 211

  Fly   342 ---LIHNRSEFTDKQLVKLQESPDDMAAGQTPHNVLLYAHNDLVDKVQPGDRVTVTGIYRATPL- 402
               :|.:|....|.|..:|||:||.:..|:.|.::.||....|.|:|.||:||||.|||....: 
Zfish   212 PYFIIPDRCVCVDFQTQRLQEAPDAVPHGEMPRHMQLYCDRYLCDRVVPGNRVTVMGIYSIKKVA 276

  Fly   403 ------KTGGLSSSVKSVYKTHVDVVHFRKVDNKRLYEDEEGKDHIFPPERVELLQLLAKKPDIY 461
                  :..|....::|.|...|.:    .||.:.......|.   ..|:..|.|:.||..|.:|
Zfish   277 QTKAKGRDKGTGVGIRSAYLRVVGI----DVDTEGAGRGATGS---VSPQEEEELRSLAASPSVY 334

  Fly   462 DRLARAIAPSIYENDDIKKGILLQLFGGTKKKHAT-LGRQNFRSEIHLLLCGDPGTSKSQMLQYV 525
            |.|||::|||||.:||:||.|...||||::|:... |.|   |.:|:||:.|||||:|||:|::|
Zfish   335 DSLARSLAPSIYGSDDLKKAIACLLFGGSRKRLPDGLTR---RGDINLLMLGDPGTAKSQLLKFV 396

  Fly   526 FNLVPRSQYTSGRGSSAVGLTAYVTKDPETRQLVLQTGALVLADNGVCCIDEFDKMNDSTRSVLH 590
            ....|...||||:||||.||||.|.:||.||..|::.||:||||.||.||||||||.:..|..:|
Zfish   397 ERCSPIGVYTSGKGSSAAGLTASVLRDPTTRGFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIH 461

  Fly   591 EVMEQQTLSIAKAGIICQLNARTSILAAANPAESQWNKRKNIIDNVQLPHTLLSRFDLIFLVLDP 655
            |.|||||:|||||||...||:|.|:|||||....:|:..|. .||:....|:|||||:||::.|.
Zfish   462 EAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDDTKG-EDNIDFMPTILSRFDMIFIIKDH 525

  Fly   656 QDEIFDKRLASHLVSLYY--VTRHEEEDTMFDMSVLRDYIAYAREHLSPTLSDEAQQRLIQAYVD 718
            .|:..|..||.|:::::.  .|:.|..:....::.|:.||||:|....|.||..|.::|...||.
Zfish   526 HDQQRDMTLARHVMNVHLSAQTQTEGVEGEIPLATLKKYIAYSRVKCGPRLSAAAAEKLKNRYVL 590

  Fly   719 MRKVGA--------GRGQISAYPRQLESLIRLSEAHAKVRLSNQVELLDVEEAWRLHREALKQSA 775
            ||. ||        .|..|....||||:::|::|:.||::|.......:|:||.||.:.:...:|
Zfish   591 MRS-GAKEHERETDRRVSIPITVRQLEAVVRIAESLAKMKLQPIAGEEEVDEALRLFQVSTLDAA 654

  Fly   776 TDPLSGKIDVGILTTGLSTAARKKRADLVAAIKENLKKKGKVLTVPYQKLFSDIKEGSQIMITRE 840
               |||.:      :|:.....::..::::.|::.||::..:              |||:. ...
Zfish   655 ---LSGSL------SGVEGFTTQEDQEMISRIEKQLKRRFAI--------------GSQVS-EHS 695

  Fly   841 QFEDALKEVQDEGAI 855
            ..:|..|:...|.||
Zfish   696 IIQDFAKQKYPEHAI 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpaNP_001286160.1 PHA03307 2..>150 CDD:223039
MCM_N 168..267 CDD:379644 25/106 (24%)
MCM 270..772 CDD:214631 204/529 (39%)
mcm5NP_848523.2 MCM_N 35..154 CDD:291233 32/130 (25%)
MCM 134..651 CDD:214631 204/529 (39%)
AAA 378..522 CDD:99707 83/144 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1241
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D232729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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